Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PDZRN3Q9UPQ7 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
PDZRN3Q9UPQ7 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PDZRN3Q9UPQ7 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 GTF2IP1-202ENST00000614592 2047 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 SNORA10B-201ENST00000384458 133 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 OOSP1-201ENST00000398992 1270 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 SLC4A1APP1-201ENST00000419995 602 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 GPN3P1-201ENST00000423883 535 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 SNX18P3-201ENST00000424993 835 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 OR52S1P-201ENST00000427016 937 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 OSTCP2-201ENST00000437956 444 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 PPIA-203ENST00000451562 544 ntTSL 2 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AC018892.2-201ENST00000457656 693 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AC025271.1-201ENST00000485045 429 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 HMGB1P38-201ENST00000490557 577 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 MRPS5P3-201ENST00000515577 166 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 OR4A2P-201ENST00000527276 913 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AC005070.2-201ENST00000604391 260 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AL451085.1-201ENST00000604546 690 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AC069499.2-201ENST00000610665 382 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AC073114.1-201ENST00000612027 490 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 AL645927.2-201ENST00000618350 349 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 COL6A4P1-202ENST00000487147 4317 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 YES1P1-201ENST00000418510 1628 ntBASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PDZRN3Q9UPQ7 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 RAD1P1-201ENST00000231383 813 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 U3.14-201ENST00000365363 227 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AL034417.1-201ENST00000399343 800 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 OR52N3P-201ENST00000413417 934 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AC138393.2-201ENST00000414742 246 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 MTND6P1-201ENST00000417434 424 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 PTP4A1P7-201ENST00000423476 514 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 NPM1P22-201ENST00000427761 952 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 ANKRD54P1-201ENST00000433115 471 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AC027124.1-201ENST00000440852 466 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AL356133.1-201ENST00000444762 372 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AL358794.1-201ENST00000445689 381 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 GAPDHP16-201ENST00000448152 962 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 RPSAP24-201ENST00000461543 873 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 TUBBP11-201ENST00000472255 252 ntBASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms