Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC003992.1-201ENST00000635364 557 ntBASIC7.88□□□□□ -1.15
SCN11AQ9UI33 OR8G3P-202ENST00000641572 1255 ntBASIC7.88□□□□□ -1.15
SCN11AQ9UI33 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 TNPO1P2-201ENST00000426249 2665 ntBASIC7.88□□□□□ -1.15
SCN11AQ9UI33 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCN11AQ9UI33 AL136531.3-201ENST00000624378 3658 ntBASIC7.88□□□□□ -1.15
SCN11AQ9UI33 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 RPS2P45-201ENST00000469997 2057 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 RNA5SP478-201ENST00000364657 115 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 OR7E101P-201ENST00000400428 513 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 RPS3AP2-201ENST00000407190 754 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 RNA5SP178-201ENST00000410380 128 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 RPS15AP30-201ENST00000420976 390 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 RPSAP39-201ENST00000467439 883 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 AC008638.1-201ENST00000506035 866 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 SNORA70.20-201ENST00000516848 126 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 AC135626.1-201ENST00000556983 435 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 AC016180.1-201ENST00000567945 403 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 AC106872.5-201ENST00000508856 1416 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 SNORA64.1-201ENST00000362600 132 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 AC015802.2-201ENST00000589690 189 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 AC004948.1-201ENST00000609858 672 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 AC022919.1-201ENST00000624979 626 ntBASIC7.87□□□□□ -1.15
SCN11AQ9UI33 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.87□□□□□ -1.15
SCN11AQ9UI33 AC011815.2-201ENST00000618230 2021 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 AC096921.2-201ENST00000561507 1916 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 RPL36P18-201ENST00000419316 318 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 SDC4P-201ENST00000453285 601 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 AC104164.1-201ENST00000460282 590 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 RPS4XP14-201ENST00000493072 781 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 DPPA2P4-201ENST00000563717 878 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 OR7E18P-201ENST00000592589 702 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 RN7SL544P-201ENST00000617232 284 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 TCL6_3.1-201ENST00000619064 137 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 RN7SL763P-201ENST00000620922 284 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 AC011504.1-201ENST00000623331 4103 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms