Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP005131.7-201ENST00000610087 611 ntBASIC7.24□□□□□ -1.25
COL20A1Q9P218 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.24□□□□□ -1.25
COL20A1Q9P218 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.24□□□□□ -1.25
COL20A1Q9P218 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL20A1Q9P218 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL20A1Q9P218 AC125238.2-201ENST00000430003 1440 ntBASIC7.24□□□□□ -1.25
COL20A1Q9P218 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL20A1Q9P218 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL20A1Q9P218 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL20A1Q9P218 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL20A1Q9P218 AP003486.1-201ENST00000525716 3994 ntBASIC7.24□□□□□ -1.25
COL20A1Q9P218 MAPK10-344ENST00000641718 3746 ntBASIC7.24□□□□□ -1.25
COL20A1Q9P218 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL20A1Q9P218 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL20A1Q9P218 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 RN7SKP15-201ENST00000364742 309 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC069154.1-201ENST00000432914 542 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC013410.1-201ENST00000436223 1232 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 AMYP1-201ENST00000440059 1023 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC114878.1-201ENST00000441166 358 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 GAPDHP16-201ENST00000448152 962 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 AL500527.1-201ENST00000448532 255 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 RN7SL714P-201ENST00000487050 298 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 KHDC1P1-201ENST00000511053 508 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC108103.1-201ENST00000511286 446 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC090115.2-201ENST00000548060 883 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC002310.3-201ENST00000569728 723 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC010998.3-201ENST00000613871 631 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 HPVC1-201ENST00000629899 1198 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 AL139254.3-201ENST00000641097 674 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 NCOA4P3-201ENST00000513203 1877 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 AC012213.2-201ENST00000562917 4597 ntBASIC7.23□□□□□ -1.25
COL20A1Q9P218 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL20A1Q9P218 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
COL20A1Q9P218 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL20A1Q9P218 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL20A1Q9P218 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL20A1Q9P218 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL20A1Q9P218 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL20A1Q9P218 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 RN7SKP275-201ENST00000364626 301 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 RN7SKP121-201ENST00000410842 305 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 USP9YP19-201ENST00000412165 485 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL20A1Q9P218 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 AL358876.1-201ENST00000453364 1075 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 AP002453.1-201ENST00000492327 668 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 SNORA70.17-201ENST00000516449 133 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC084337.1-201ENST00000524809 686 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC090826.1-203ENST00000569235 490 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC005726.4-201ENST00000582858 458 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 RPL21P136-201ENST00000605378 396 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC025262.3-201ENST00000623666 360 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC130448.2-201ENST00000624082 374 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms