Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.66□□□□□ -1.34
CISHQ9NSE2 AL078601.3-201ENST00000573303 535 ntBASIC6.66□□□□□ -1.34
CISHQ9NSE2 NPIPB1P-202ENST00000588786 828 ntBASIC6.66□□□□□ -1.34
CISHQ9NSE2 AC022106.1-201ENST00000612834 766 ntBASIC6.66□□□□□ -1.34
CISHQ9NSE2 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.66□□□□□ -1.34
CISHQ9NSE2 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.66□□□□□ -1.34
CISHQ9NSE2 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.66□□□□□ -1.34
CISHQ9NSE2 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CISHQ9NSE2 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CISHQ9NSE2 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.66□□□□□ -1.34
CISHQ9NSE2 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CISHQ9NSE2 HDAC1P2-201ENST00000453661 1398 ntBASIC6.66□□□□□ -1.34
CISHQ9NSE2 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CISHQ9NSE2 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CISHQ9NSE2 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
CISHQ9NSE2 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.66□□□□□ -1.34
CISHQ9NSE2 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CISHQ9NSE2 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CISHQ9NSE2 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CISHQ9NSE2 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CISHQ9NSE2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CISHQ9NSE2 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CISHQ9NSE2 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CISHQ9NSE2 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CISHQ9NSE2 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CISHQ9NSE2 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 RN7SKP171-201ENST00000364417 303 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 AL359885.1-201ENST00000415786 903 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 GAPDHP59-201ENST00000435908 267 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 GAPDHP23-201ENST00000444823 993 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 OR7E22P-201ENST00000478335 1035 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 RPL34P33-201ENST00000486062 334 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 EIF4E2P2-201ENST00000492033 736 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 RN7SL362P-201ENST00000494228 267 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 AL117692.1-201ENST00000494283 713 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 MTND6P8-201ENST00000503471 522 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 AC113367.2-201ENST00000505749 160 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 HMGN1P17-201ENST00000513734 295 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 RNA5SP441-201ENST00000516809 88 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 Y_RNA.710-201ENST00000516975 110 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 NPIPB14P-203ENST00000532298 987 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CISHQ9NSE2 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 AC004232.2-201ENST00000574245 821 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 OR7A1P-202ENST00000641542 1158 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 AC096921.2-201ENST00000561507 1916 ntBASIC6.65□□□□□ -1.34
CISHQ9NSE2 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
CISHQ9NSE2 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
CISHQ9NSE2 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.65□□□□□ -1.35
CISHQ9NSE2 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
CISHQ9NSE2 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.65□□□□□ -1.35
CISHQ9NSE2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
CISHQ9NSE2 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CISHQ9NSE2 AC018717.1-201ENST00000457712 1505 ntBASIC6.65□□□□□ -1.35
CISHQ9NSE2 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CISHQ9NSE2 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
CISHQ9NSE2 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.35
CISHQ9NSE2 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 YWHAZP6-201ENST00000399764 738 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 RN7SKP108-201ENST00000411367 328 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 AC116036.1-201ENST00000412199 367 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 TMA16P2-201ENST00000413187 601 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 AL035422.1-201ENST00000414193 397 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 AL590004.3-202ENST00000445883 451 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 AC005165.2-201ENST00000466070 380 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 RPL12P30-201ENST00000488389 499 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 FTH1P8-201ENST00000498161 514 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 AC112484.3-201ENST00000505910 329 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 OR4A40P-201ENST00000533878 948 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 OR1E3-201ENST00000575608 948 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 AL137246.2-201ENST00000613439 662 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 AC003992.1-201ENST00000635364 557 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 AL596275.2-208ENST00000641192 594 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 EIF3EP1-201ENST00000433978 1316 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms