Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RPS26P38-201ENST00000414476 348 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 OR6R1P-201ENST00000431838 940 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 AC016908.1-201ENST00000442571 1219 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 WDR82P2-201ENST00000444540 928 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 RN7SL643P-201ENST00000471845 291 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 RN7SL369P-201ENST00000477138 299 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 RN7SL714P-201ENST00000487050 298 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 NACAP5-201ENST00000509863 636 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 AC008429.4-201ENST00000521201 182 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 AC024405.1-201ENST00000532521 1042 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 RPA2P3-201ENST00000533268 770 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 AC012175.1-201ENST00000603755 531 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
RSPO3Q9BXY4 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 UG0898H09-202ENST00000623646 7040 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 SNORA43.1-201ENST00000364863 140 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 MIR1266-201ENST00000408125 84 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 GAPDHP23-201ENST00000444823 993 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 PPIAP32-201ENST00000449940 472 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AL133351.3-201ENST00000454998 193 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 RANP2-201ENST00000456833 229 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 OR51A1P-201ENST00000511110 946 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC023968.1-201ENST00000560719 475 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC068408.1-201ENST00000577406 1144 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 SYPL1P2-201ENST00000582878 727 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC026898.1-201ENST00000586404 571 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 GLYATL1P2-202ENST00000588046 902 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC020916.2-201ENST00000591242 360 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AL589743.6-201ENST00000611025 117 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC022106.1-201ENST00000612834 766 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 MIR7159-201ENST00000620587 66 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AL137067.2-201ENST00000621202 131 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AL596275.2-207ENST00000641188 675 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC022164.1-201ENST00000568767 2673 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms