Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 SNORA70.9-201ENST00000384370 135 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 SNORD94-201ENST00000386037 137 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 ARSFP1-201ENST00000398758 477 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 CBX1P3-201ENST00000413296 527 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 H3F3BP1-201ENST00000440551 403 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AC103563.5-201ENST00000455643 364 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 OR9A1P-202ENST00000484361 945 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AC139713.1-202ENST00000512366 460 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 RNA5SP96-201ENST00000516041 107 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 KCTD9P6-201ENST00000522306 950 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AC131935.1-201ENST00000524621 333 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AC009729.1-201ENST00000548873 1133 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 MIR3159-201ENST00000584572 74 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AC036176.3-201ENST00000602456 418 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 SNORA74.4-201ENST00000607595 199 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AC096586.2-201ENST00000610260 441 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 AP003400.2-201ENST00000624036 666 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM5Q96HC4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC005225.5-201ENST00000623547 2225 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AKAP17BP-201ENST00000431706 2719 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC068769.1-201ENST00000474767 2426 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 FUNDC2P3-201ENST00000334716 533 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 RNA5SP85-201ENST00000365378 119 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 RNU11-6P-201ENST00000391127 133 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AL033519.1-201ENST00000407266 307 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 UBTFL2-201ENST00000411859 1191 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 MTND4LP21-201ENST00000415303 295 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 WDR82P2-201ENST00000444540 928 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 RNU6-943P-201ENST00000516960 98 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC008055.1-201ENST00000547032 609 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC090115.2-201ENST00000548060 883 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 MIR3189-201ENST00000578735 73 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 RN7SL475P-201ENST00000583379 298 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC026898.1-201ENST00000586404 571 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AL589863.1-201ENST00000595383 631 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC068213.1-201ENST00000625124 226 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AL136984.1-201ENST00000607611 1893 ntBASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms