Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AP003385.2-201ENST00000524910 973 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC7.95□□□□□ -1.14
TRIM11Q96F44 AC016957.1-201ENST00000534895 309 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 ERP27-202ENST00000540097 993 ntTSL 2 BASIC7.95□□□□□ -1.14
TRIM11Q96F44 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.95□□□□□ -1.14
TRIM11Q96F44 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.95□□□□□ -1.14
TRIM11Q96F44 AC135626.1-201ENST00000556983 435 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 ZNF519P3-201ENST00000557158 1032 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC7.95□□□□□ -1.14
TRIM11Q96F44 AC092325.1-201ENST00000566449 554 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 MIR3689F-201ENST00000579617 66 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 AC090616.2-202ENST00000584248 222 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 AL137190.1-201ENST00000603288 282 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 AC011374.2-201ENST00000607135 526 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 AL136985.2-201ENST00000607372 535 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TRIM11Q96F44 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
TRIM11Q96F44 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC7.95□□□□□ -1.14
TRIM11Q96F44 RPL36AP21-202ENST00000639134 430 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.95□□□□□ -1.14
TRIM11Q96F44 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.95□□□□□ -1.14
TRIM11Q96F44 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TRIM11Q96F44 ZNF812P-201ENST00000457674 1694 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TRIM11Q96F44 AL096816.1-201ENST00000623300 2920 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TRIM11Q96F44 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.95□□□□□ -1.14
TRIM11Q96F44 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
TRIM11Q96F44 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
TRIM11Q96F44 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.95□□□□□ -1.14
TRIM11Q96F44 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.95□□□□□ -1.14
TRIM11Q96F44 AC241584.2-201ENST00000637142 2090 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 NF1P8-201ENST00000415351 1461 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 Y_RNA.390-201ENST00000383932 102 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 U3.28-201ENST00000391249 210 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 AL136310.1-201ENST00000404926 654 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 DDX11L10-201ENST00000430178 571 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 ATP5HP2-201ENST00000433885 485 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC241584.1-201ENST00000438469 1241 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 MTND4LP16-201ENST00000440828 295 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 SS18L2P1-201ENST00000445923 213 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 AP000936.2-201ENST00000447151 681 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 RPL4P2-201ENST00000447259 1282 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC092001.1-201ENST00000453012 261 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 RPL31P58-201ENST00000469001 379 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 RN7SL414P-201ENST00000469545 294 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC090543.1-201ENST00000492168 485 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 MYL12BP2-201ENST00000503948 512 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC233724.10-201ENST00000510454 409 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC095059.2-201ENST00000510601 933 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 DPPA3P2-201ENST00000553589 478 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC245505.1-201ENST00000556398 224 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 AC002400.1-201ENST00000569310 726 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 MTND4LP24-201ENST00000572277 291 ntBASIC7.94□□□□□ -1.14
TRIM11Q96F44 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM11Q96F44 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM11Q96F44 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms