Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 LRRC37A11P-202ENST00000579258 3717 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 MIR3976HG-202ENST00000566533 1690 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC092725.2-201ENST00000567658 1389 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC092646.2-201ENST00000431242 2095 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC008817.1-201ENST00000504215 1562 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC127070.5-201ENST00000623177 2104 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 RGS17-201ENST00000206262 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 PLA2G2C-201ENST00000247992 453 ntAPPRIS P5 TSL 5 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 OR56A4-201ENST00000330728 1209 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 RNU4-7P-201ENST00000364758 141 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AL161909.1-201ENST00000397390 712 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 OR6B1-201ENST00000408922 1055 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AL109913.1-201ENST00000421173 514 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 CFL1P7-201ENST00000424759 486 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 Z93242.1-201ENST00000427102 353 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 RNF11P2-201ENST00000427702 440 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AL512649.1-201ENST00000428997 581 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 RPL26P34-201ENST00000431005 451 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AL365184.2-201ENST00000431139 435 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 BSNDP4-201ENST00000436076 388 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 IAH1-205ENST00000482918 863 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 RPL9P6-201ENST00000492764 598 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 PTPRG-AS1-209ENST00000495542 502 ntTSL 4 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 SETP14-201ENST00000497538 873 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC022483.1-201ENST00000514020 567 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 RNU6-314P-201ENST00000516574 104 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 IGLC5-201ENST00000519670 293 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC109635.2-202ENST00000529219 500 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 NPIPB14P-203ENST00000532298 987 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AP002453.2-201ENST00000533503 320 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 PRR13P2-201ENST00000533804 406 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 DPPA2P4-201ENST00000563717 878 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 BPTFP1-201ENST00000579209 492 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC010385.2-201ENST00000603743 490 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AP003117.2-201ENST00000606010 545 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 TUG1_1.1-201ENST00000610654 145 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AL080285.2-201ENST00000612765 458 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC215522.1-201ENST00000615488 446 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC124319.3-201ENST00000616832 526 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms