Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 RNU6-114P-201ENST00000384704 105 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 DEFB108C-201ENST00000400154 252 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 RN7SKP161-201ENST00000411110 305 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AL445183.3-201ENST00000414168 502 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 MTCYBP38-201ENST00000417160 1123 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC023141.1-201ENST00000419418 379 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 Z83313.1-201ENST00000433780 718 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC245452.2-201ENST00000435222 392 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 NANOGP2-201ENST00000435391 727 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 RPS29P5-201ENST00000452777 171 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 MRPL42P4-201ENST00000453267 443 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC234771.3-201ENST00000454984 622 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 SUMO2P2-201ENST00000456482 255 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 RN7SL180P-201ENST00000466769 294 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC004815.1-201ENST00000484185 331 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC092045.1-201ENST00000495716 1231 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC084871.2-201ENST00000503355 464 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 MTCO2P30-201ENST00000503662 364 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 PCNAP1-201ENST00000505363 709 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 HSPE1P10-201ENST00000508631 558 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 DUXAP2-201ENST00000519198 589 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 NDUFA5P2-201ENST00000519723 344 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 OR7E96P-201ENST00000530816 976 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 DPPA2P4-201ENST00000563717 878 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 MIR4685-201ENST00000578185 69 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 RN7SL14P-201ENST00000579715 298 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 RN7SL178P-201ENST00000582930 304 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC007136.1-201ENST00000589141 199 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC087683.1-201ENST00000591187 441 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 MIMT1-201ENST00000597105 1050 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 MIR6731-201ENST00000614863 72 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 RNF19BPY-201ENST00000458209 1550 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 MTCO1P28-201ENST00000574177 1528 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms