Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC090543.1-201ENST00000492168 485 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 OR4G11P-201ENST00000492842 939 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 MTCO2P30-201ENST00000503662 364 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AP001646.1-201ENST00000527936 915 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC011270.1-201ENST00000558606 583 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC092325.1-201ENST00000566449 554 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 MTND4LP24-201ENST00000572277 291 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC036176.3-201ENST00000602456 418 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC009878.1-201ENST00000621819 340 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC112204.3-201ENST00000623822 332 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 LRRC37A6P-202ENST00000448648 5444 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AL049776.1-201ENST00000624600 2025 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 Y_RNA.41-201ENST00000362646 102 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC245036.1-201ENST00000391727 309 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AL353133.1-201ENST00000407695 401 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 SPATA20P1-201ENST00000423089 438 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC083855.1-201ENST00000440041 258 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AL031681.1-201ENST00000443304 400 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC003071.1-201ENST00000451219 789 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 RN7SL393P-201ENST00000463588 296 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 RN7SL83P-201ENST00000468131 297 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 ARL4AP1-201ENST00000503220 705 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC026782.2-201ENST00000510845 636 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 RNA5SP473-201ENST00000516402 125 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 Y_RNA.695-201ENST00000516715 107 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 RNU6-889P-201ENST00000517189 103 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 OR7D1P-201ENST00000592739 933 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AL121757.2-201ENST00000611223 313 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC026368.1-201ENST00000614934 690 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC015726.3-201ENST00000624501 418 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC008937.3-201ENST00000606813 1700 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 AC011815.2-201ENST00000618230 2021 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RC3H1Q5TC82 EEF1A1P20-201ENST00000514852 1386 ntBASIC9.24□□□□□ -0.93
RC3H1Q5TC82 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AL158152.1-201ENST00000602652 1435 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 ZNF680P1-201ENST00000436625 1469 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AL359263.1-201ENST00000441188 2796 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 ATP8A2P3-201ENST00000426792 1536 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms