Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC005034.3-201ENST00000604845 1747 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 BRD7P6-201ENST00000431406 1860 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AC007406.5-201ENST00000570140 3170 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AC073342.2-201ENST00000595842 1800 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 OR52B5P-204ENST00000641744 3467 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PDS5AQ29RF7 LYARP1-201ENST00000436977 1501 ntBASIC7.55□□□□□ -1.2
PDS5AQ29RF7 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 OR11H13P-201ENST00000359695 979 ntBASIC7.54□□□□□ -1.2
PDS5AQ29RF7 UBE2V1P14-201ENST00000415815 558 ntBASIC7.54□□□□□ -1.2
PDS5AQ29RF7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 CFL1P4-201ENST00000451536 498 ntBASIC7.54□□□□□ -1.2
PDS5AQ29RF7 AC094085.1-201ENST00000468914 584 ntBASIC7.54□□□□□ -1.2
PDS5AQ29RF7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 RPL12P24-201ENST00000474907 486 ntBASIC7.54□□□□□ -1.2
PDS5AQ29RF7 AC023818.1-201ENST00000498379 384 ntBASIC7.54□□□□□ -1.2
PDS5AQ29RF7 AC025458.1-201ENST00000506046 166 ntBASIC7.54□□□□□ -1.2
PDS5AQ29RF7 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 TRIM77BP-201ENST00000524985 1119 ntBASIC7.54□□□□□ -1.2
PDS5AQ29RF7 AP004607.6-201ENST00000525033 1202 ntBASIC7.54□□□□□ -1.2
PDS5AQ29RF7 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 AC006924.1-201ENST00000610750 559 ntBASIC7.54□□□□□ -1.2
PDS5AQ29RF7 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDS5AQ29RF7 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 RNA5SP478-201ENST00000364657 115 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 LCN1P2-201ENST00000372030 223 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AL445238.1-204ENST00000400311 463 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 KCTD9P1-201ENST00000430462 1167 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AC016908.1-201ENST00000442571 1219 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AL359839.1-201ENST00000451975 1160 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AC023194.2-201ENST00000465398 406 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AL158068.1-201ENST00000506116 616 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 NANOGNBP2-201ENST00000544753 553 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AC027229.1-201ENST00000583887 253 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 CDY5P-201ENST00000411487 1580 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 CDY9P-201ENST00000451397 1580 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AC008957.3-201ENST00000624112 2242 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 EIF3EP1-201ENST00000433978 1316 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 AC063923.1-201ENST00000478982 1619 ntBASIC7.53□□□□□ -1.2
PDS5AQ29RF7 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDS5AQ29RF7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms