Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
H3F3AP84243 LINC01613-201ENST00000561476 2780 ntBASIC5.7□□□□□ -1.5
H3F3AP84243 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.7□□□□□ -1.5
H3F3AP84243 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.7□□□□□ -1.5
H3F3AP84243 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.69□□□□□ -1.5
H3F3AP84243 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.69□□□□□ -1.5
H3F3AP84243 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 AL157831.2-201ENST00000564681 3095 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
H3F3AP84243 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.69□□□□□ -1.5
H3F3AP84243 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
H3F3AP84243 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 PRELID1P1-201ENST00000403549 660 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 OR2W4P-201ENST00000406496 926 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.69□□□□□ -1.5
H3F3AP84243 DHFRP2-201ENST00000414224 547 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.69□□□□□ -1.5
H3F3AP84243 NPM1P25-201ENST00000429734 854 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 EMC3-AS1-205ENST00000438698 534 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.69□□□□□ -1.5
H3F3AP84243 RN7SL39P-201ENST00000462264 297 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 GM2AP2-201ENST00000491764 562 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 AC117500.1-201ENST00000497352 755 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.69□□□□□ -1.5
H3F3AP84243 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.69□□□□□ -1.5
H3F3AP84243 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.69□□□□□ -1.5
H3F3AP84243 RN7SKP248-201ENST00000516278 305 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.69□□□□□ -1.5
H3F3AP84243 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.69□□□□□ -1.5
H3F3AP84243 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.69□□□□□ -1.5
H3F3AP84243 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.69□□□□□ -1.5
H3F3AP84243 CYCSP25-201ENST00000525280 316 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.69□□□□□ -1.5
H3F3AP84243 AC009729.1-201ENST00000548873 1133 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.69□□□□□ -1.5
H3F3AP84243 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.69□□□□□ -1.5
H3F3AP84243 WBP1LP11-201ENST00000586141 328 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.69□□□□□ -1.5
H3F3AP84243 AC005332.4-201ENST00000592752 579 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 AC012368.3-201ENST00000604190 219 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.69□□□□□ -1.5
H3F3AP84243 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 AC024255.1-201ENST00000614376 102 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 AC021422.1-201ENST00000621212 473 ntBASIC5.69□□□□□ -1.5
H3F3AP84243 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
H3F3AP84243 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.69□□□□□ -1.5
H3F3AP84243 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3AP84243 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.68□□□□□ -1.5
H3F3AP84243 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
H3F3AP84243 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
H3F3AP84243 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
H3F3AP84243 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.68□□□□□ -1.5
H3F3AP84243 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.68□□□□□ -1.5
H3F3AP84243 Z95114.1-201ENST00000624264 14574 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
H3F3AP84243 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3AP84243 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 AC003045.1-201ENST00000398779 713 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
H3F3AP84243 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.68□□□□□ -1.5
H3F3AP84243 CYP4F30P-202ENST00000420048 405 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.68□□□□□ -1.5
H3F3AP84243 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3AP84243 LINC00328-2P-201ENST00000436585 219 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.68□□□□□ -1.5
H3F3AP84243 GTF2IP14-201ENST00000441415 586 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3AP84243 COX4I1P2-201ENST00000447446 547 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.68□□□□□ -1.5
H3F3AP84243 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3AP84243 RPL9P15-201ENST00000491096 532 ntBASIC5.68□□□□□ -1.5
H3F3AP84243 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3AP84243 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms