Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.74□□□□□ -1.49
CXCR4P61073 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.74□□□□□ -1.49
CXCR4P61073 AC061999.1-201ENST00000624454 177 ntBASIC5.74□□□□□ -1.49
CXCR4P61073 AL035425.4-201ENST00000624509 1063 ntBASIC5.74□□□□□ -1.49
CXCR4P61073 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.74□□□□□ -1.49
CXCR4P61073 HDAC1P2-201ENST00000453661 1398 ntBASIC5.74□□□□□ -1.49
CXCR4P61073 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CXCR4P61073 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CXCR4P61073 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.74□□□□□ -1.49
CXCR4P61073 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CXCR4P61073 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.74□□□□□ -1.49
CXCR4P61073 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CXCR4P61073 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CXCR4P61073 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.73□□□□□ -1.49
CXCR4P61073 AL449283.1-201ENST00000602631 3403 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CXCR4P61073 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CXCR4P61073 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CXCR4P61073 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.73□□□□□ -1.49
CXCR4P61073 RNA5SP453-201ENST00000362503 119 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 RN7SKP130-201ENST00000364924 301 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.73□□□□□ -1.49
CXCR4P61073 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CXCR4P61073 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.73□□□□□ -1.49
CXCR4P61073 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CXCR4P61073 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CXCR4P61073 SSR1P1-201ENST00000407630 814 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CXCR4P61073 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.73□□□□□ -1.49
CXCR4P61073 AL139184.1-202ENST00000422303 222 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.73□□□□□ -1.49
CXCR4P61073 SUMO2P8-201ENST00000434672 286 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 AL731534.1-201ENST00000434711 269 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.73□□□□□ -1.49
CXCR4P61073 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.73□□□□□ -1.49
CXCR4P61073 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.73□□□□□ -1.49
CXCR4P61073 GAPDHP33-201ENST00000443168 1013 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.73□□□□□ -1.49
CXCR4P61073 VPS25P1-201ENST00000455691 508 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.73□□□□□ -1.49
CXCR4P61073 RN7SL37P-201ENST00000490461 307 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.73□□□□□ -1.49
CXCR4P61073 ST13P12-201ENST00000508958 1094 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CXCR4P61073 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CXCR4P61073 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.73□□□□□ -1.49
CXCR4P61073 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.73□□□□□ -1.49
CXCR4P61073 VDAC2P2-201ENST00000544463 901 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.73□□□□□ -1.49
CXCR4P61073 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.73□□□□□ -1.49
CXCR4P61073 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.73□□□□□ -1.49
CXCR4P61073 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.73□□□□□ -1.49
CXCR4P61073 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.73□□□□□ -1.49
CXCR4P61073 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.73□□□□□ -1.49
CXCR4P61073 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.73□□□□□ -1.49
CXCR4P61073 AC007347.2-201ENST00000623044 180 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 AC073488.9-201ENST00000631601 754 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 MAPK10-350ENST00000641777 965 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CXCR4P61073 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CXCR4P61073 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.73□□□□□ -1.49
CXCR4P61073 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CXCR4P61073 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.73□□□□□ -1.49
CXCR4P61073 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.73□□□□□ -1.49
CXCR4P61073 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.73□□□□□ -1.49
CXCR4P61073 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CXCR4P61073 AC083837.1-201ENST00000565297 2994 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 DNM1P47-203ENST00000571780 12667 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CXCR4P61073 TUBBP10-201ENST00000427668 1301 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 PSMC1P4-201ENST00000515236 1327 ntBASIC5.73□□□□□ -1.49
CXCR4P61073 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CXCR4P61073 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.72□□□□□ -1.49
CXCR4P61073 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CXCR4P61073 AC092701.1-201ENST00000623627 1551 ntBASIC5.72□□□□□ -1.49
CXCR4P61073 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CXCR4P61073 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CXCR4P61073 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.72□□□□□ -1.49
CXCR4P61073 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CXCR4P61073 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.72□□□□□ -1.49
CXCR4P61073 OR5M2P-202ENST00000641241 4242 ntBASIC5.72□□□□□ -1.49
CXCR4P61073 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.72□□□□□ -1.49
CXCR4P61073 PPBPP2-201ENST00000513150 1362 ntBASIC5.72□□□□□ -1.49
CXCR4P61073 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CXCR4P61073 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CXCR4P61073 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CXCR4P61073 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
CXCR4P61073 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CXCR4P61073 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CXCR4P61073 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CXCR4P61073 MIR133A2-201ENST00000347538 102 ntBASIC5.72□□□□□ -1.49
CXCR4P61073 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CXCR4P61073 Y_RNA.209-201ENST00000364156 111 ntBASIC5.72□□□□□ -1.49
CXCR4P61073 RNA5SP152-201ENST00000365184 110 ntBASIC5.72□□□□□ -1.49
CXCR4P61073 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CXCR4P61073 AL391419.1-201ENST00000398901 1275 ntBASIC5.72□□□□□ -1.49
CXCR4P61073 AL079341.1-201ENST00000404701 1207 ntBASIC5.72□□□□□ -1.49
CXCR4P61073 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.72□□□□□ -1.49
CXCR4P61073 AC000089.1-201ENST00000424559 801 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms