Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
HMGCS2P54868 RNF19BPY-201ENST00000458209 1550 ntBASIC7.25□□□□□ -1.25
HMGCS2P54868 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
HMGCS2P54868 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HMGCS2P54868 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HMGCS2P54868 RBMY1HP-201ENST00000382759 1389 ntBASIC7.25□□□□□ -1.25
HMGCS2P54868 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.25□□□□□ -1.25
HMGCS2P54868 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HMGCS2P54868 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HMGCS2P54868 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.25□□□□□ -1.25
HMGCS2P54868 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.25□□□□□ -1.25
HMGCS2P54868 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.25□□□□□ -1.25
HMGCS2P54868 AC002486.2-201ENST00000447806 590 ntBASIC7.25□□□□□ -1.25
HMGCS2P54868 OR13C1P-201ENST00000457612 963 ntBASIC7.25□□□□□ -1.25
HMGCS2P54868 UBFD1P1-201ENST00000473259 814 ntBASIC7.25□□□□□ -1.25
HMGCS2P54868 NPM1P27-201ENST00000502784 830 ntBASIC7.25□□□□□ -1.25
HMGCS2P54868 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.25□□□□□ -1.25
HMGCS2P54868 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.25□□□□□ -1.25
HMGCS2P54868 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
HMGCS2P54868 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HMGCS2P54868 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.25□□□□□ -1.25
HMGCS2P54868 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC7.25□□□□□ -1.25
HMGCS2P54868 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.25□□□□□ -1.25
HMGCS2P54868 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.25□□□□□ -1.25
HMGCS2P54868 AP005119.1-201ENST00000580956 292 ntBASIC7.25□□□□□ -1.25
HMGCS2P54868 AC090236.2-201ENST00000587933 1101 ntBASIC7.25□□□□□ -1.25
HMGCS2P54868 NPIPB1P-202ENST00000588786 828 ntBASIC7.25□□□□□ -1.25
HMGCS2P54868 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.25□□□□□ -1.25
HMGCS2P54868 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.25□□□□□ -1.25
HMGCS2P54868 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.25□□□□□ -1.25
HMGCS2P54868 AC105114.1-201ENST00000624795 1862 ntBASIC7.25□□□□□ -1.25
HMGCS2P54868 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HMGCS2P54868 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
HMGCS2P54868 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
HMGCS2P54868 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
HMGCS2P54868 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
HMGCS2P54868 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
HMGCS2P54868 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.24□□□□□ -1.25
HMGCS2P54868 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.24□□□□□ -1.25
HMGCS2P54868 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 CUBNP3-201ENST00000457461 1784 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 AC005332.9-201ENST00000620266 2921 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 OR52B3P-201ENST00000314715 928 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 RNA5SP178-201ENST00000410380 128 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 U3.43-201ENST00000410734 213 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 AC245096.1-201ENST00000413104 546 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 AL713922.1-201ENST00000416477 747 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.24□□□□□ -1.25
HMGCS2P54868 SEPT14P12-201ENST00000442280 560 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AC011476.1-201ENST00000466725 307 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 RN7SL273P-201ENST00000481561 299 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.24□□□□□ -1.25
HMGCS2P54868 SNORA58-201ENST00000505219 137 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.24□□□□□ -1.25
HMGCS2P54868 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.24□□□□□ -1.25
HMGCS2P54868 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.24□□□□□ -1.25
HMGCS2P54868 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.24□□□□□ -1.25
HMGCS2P54868 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.24□□□□□ -1.25
HMGCS2P54868 AC126175.1-201ENST00000617041 758 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 AC096708.4-201ENST00000620563 552 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.24□□□□□ -1.25
HMGCS2P54868 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.24□□□□□ -1.25
HMGCS2P54868 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
HMGCS2P54868 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
HMGCS2P54868 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.24□□□□□ -1.25
HMGCS2P54868 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HMGCS2P54868 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 AC022325.1-201ENST00000502748 2199 ntBASIC7.23□□□□□ -1.25
HMGCS2P54868 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.23□□□□□ -1.25
HMGCS2P54868 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.23□□□□□ -1.25
HMGCS2P54868 NDUFS5P5-201ENST00000437256 321 ntBASIC7.23□□□□□ -1.25
HMGCS2P54868 AC005077.1-201ENST00000449226 375 ntBASIC7.23□□□□□ -1.25
HMGCS2P54868 RN7SL193P-201ENST00000491708 276 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms