Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SMARCA2P51531 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SMARCA2P51531 EEF1B2P6-201ENST00000445713 673 ntBASIC10.9□□□□□ -0.67
SMARCA2P51531 GAPDHP71-201ENST00000511530 1003 ntBASIC10.9□□□□□ -0.67
SMARCA2P51531 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC10.9□□□□□ -0.67
SMARCA2P51531 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC10.9□□□□□ -0.67
SMARCA2P51531 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SMARCA2P51531 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SMARCA2P51531 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SMARCA2P51531 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SMARCA2P51531 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SMARCA2P51531 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
SMARCA2P51531 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SMARCA2P51531 AL359922.2-201ENST00000581788 3017 ntBASIC10.89□□□□□ -0.67
SMARCA2P51531 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMARCA2P51531 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
SMARCA2P51531 RNA5SP234-201ENST00000363916 119 ntBASIC10.89□□□□□ -0.67
SMARCA2P51531 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC10.89□□□□□ -0.67
SMARCA2P51531 AL096829.1-201ENST00000413677 457 ntBASIC10.89□□□□□ -0.67
SMARCA2P51531 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC10.89□□□□□ -0.67
SMARCA2P51531 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC10.89□□□□□ -0.67
SMARCA2P51531 AC114728.1-201ENST00000488289 483 ntBASIC10.89□□□□□ -0.67
SMARCA2P51531 AC093763.2-201ENST00000505334 1223 ntBASIC10.89□□□□□ -0.67
SMARCA2P51531 BX510359.5-201ENST00000515651 304 ntBASIC10.89□□□□□ -0.67
SMARCA2P51531 AC110056.1-201ENST00000525759 911 ntBASIC10.89□□□□□ -0.67
SMARCA2P51531 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC10.89□□□□□ -0.67
SMARCA2P51531 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC10.89□□□□□ -0.67
SMARCA2P51531 SETP3-201ENST00000581726 813 ntBASIC10.89□□□□□ -0.67
SMARCA2P51531 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC10.89□□□□□ -0.67
SMARCA2P51531 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMARCA2P51531 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMARCA2P51531 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMARCA2P51531 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMARCA2P51531 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC10.88□□□□□ -0.67
SMARCA2P51531 AC025809.2-201ENST00000625085 1802 ntBASIC10.88□□□□□ -0.67
SMARCA2P51531 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SMARCA2P51531 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC10.88□□□□□ -0.67
SMARCA2P51531 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC10.88□□□□□ -0.67
SMARCA2P51531 AC093166.4-201ENST00000457867 318 ntBASIC10.88□□□□□ -0.67
SMARCA2P51531 RN7SL72P-201ENST00000460697 269 ntBASIC10.88□□□□□ -0.67
SMARCA2P51531 AC026254.2-201ENST00000475295 371 ntBASIC10.88□□□□□ -0.67
SMARCA2P51531 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC10.88□□□□□ -0.67
SMARCA2P51531 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
SMARCA2P51531 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC10.88□□□□□ -0.67
SMARCA2P51531 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC10.88□□□□□ -0.67
SMARCA2P51531 AC068870.2-201ENST00000620635 389 ntBASIC10.88□□□□□ -0.67
SMARCA2P51531 AC022919.1-201ENST00000624979 626 ntBASIC10.88□□□□□ -0.67
SMARCA2P51531 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SMARCA2P51531 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMARCA2P51531 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC10.88□□□□□ -0.67
SMARCA2P51531 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMARCA2P51531 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
SMARCA2P51531 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC10.88□□□□□ -0.67
SMARCA2P51531 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMARCA2P51531 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMARCA2P51531 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMARCA2P51531 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
SMARCA2P51531 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMARCA2P51531 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMARCA2P51531 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SMARCA2P51531 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMARCA2P51531 AC104447.1-201ENST00000624214 2124 ntBASIC10.88□□□□□ -0.67
SMARCA2P51531 AL031595.3-201ENST00000624919 14262 ntBASIC10.87□□□□□ -0.67
SMARCA2P51531 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
SMARCA2P51531 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
SMARCA2P51531 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMARCA2P51531 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
SMARCA2P51531 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMARCA2P51531 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMARCA2P51531 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC10.87□□□□□ -0.67
SMARCA2P51531 RPS15AP30-201ENST00000420976 390 ntBASIC10.87□□□□□ -0.67
SMARCA2P51531 CFL1P1-202ENST00000432948 411 ntBASIC10.87□□□□□ -0.67
SMARCA2P51531 AC073850.1-201ENST00000449243 255 ntBASIC10.87□□□□□ -0.67
SMARCA2P51531 SLC25A14P1-201ENST00000502867 901 ntBASIC10.87□□□□□ -0.67
SMARCA2P51531 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC10.87□□□□□ -0.67
SMARCA2P51531 AC015818.6-201ENST00000584274 634 ntBASIC10.87□□□□□ -0.67
SMARCA2P51531 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC10.87□□□□□ -0.67
SMARCA2P51531 MIR6810-201ENST00000622701 70 ntBASIC10.87□□□□□ -0.67
SMARCA2P51531 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMARCA2P51531 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC10.87□□□□□ -0.67
SMARCA2P51531 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMARCA2P51531 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMARCA2P51531 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SMARCA2P51531 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC10.86□□□□□ -0.67
SMARCA2P51531 RPA2P2-201ENST00000419698 796 ntBASIC10.86□□□□□ -0.67
SMARCA2P51531 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC10.86□□□□□ -0.67
SMARCA2P51531 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
SMARCA2P51531 NPM1P27-201ENST00000502784 830 ntBASIC10.86□□□□□ -0.67
SMARCA2P51531 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC10.86□□□□□ -0.67
SMARCA2P51531 AL021918.2-201ENST00000613415 194 ntBASIC10.86□□□□□ -0.67
SMARCA2P51531 AC007204.2-201ENST00000615022 616 ntBASIC10.86□□□□□ -0.67
SMARCA2P51531 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMARCA2P51531 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
SMARCA2P51531 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SMARCA2P51531 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMARCA2P51531 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC10.86□□□□□ -0.67
SMARCA2P51531 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMARCA2P51531 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMARCA2P51531 MAPK10-344ENST00000641718 3746 ntBASIC10.86□□□□□ -0.67
SMARCA2P51531 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms