Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 AC079949.2-201ENST00000617117 2933 ntBASIC5.41□□□□□ -1.54
CDX1P47902 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDX1P47902 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 AC129502.1-201ENST00000623261 1654 ntBASIC5.41□□□□□ -1.54
CDX1P47902 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDX1P47902 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 RN7SKP237-201ENST00000364663 301 ntBASIC5.41□□□□□ -1.54
CDX1P47902 RNU1-59P-201ENST00000364829 162 ntBASIC5.41□□□□□ -1.54
CDX1P47902 AC083799.1-201ENST00000366451 910 ntBASIC5.41□□□□□ -1.54
CDX1P47902 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
CDX1P47902 PPIAP26-201ENST00000377951 522 ntBASIC5.41□□□□□ -1.54
CDX1P47902 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDX1P47902 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.41□□□□□ -1.54
CDX1P47902 AL672212.1-201ENST00000422246 400 ntBASIC5.41□□□□□ -1.54
CDX1P47902 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.41□□□□□ -1.54
CDX1P47902 AC007064.3-201ENST00000422608 359 ntBASIC5.41□□□□□ -1.54
CDX1P47902 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.41□□□□□ -1.54
CDX1P47902 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.41□□□□□ -1.54
CDX1P47902 AC018804.1-201ENST00000430381 618 ntBASIC5.41□□□□□ -1.54
CDX1P47902 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CDX1P47902 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 OR51P1P-201ENST00000447547 942 ntBASIC5.41□□□□□ -1.54
CDX1P47902 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.41□□□□□ -1.54
CDX1P47902 AC010878.1-201ENST00000456500 1047 ntBASIC5.41□□□□□ -1.54
CDX1P47902 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.41□□□□□ -1.54
CDX1P47902 AC090058.1-201ENST00000498788 435 ntBASIC5.41□□□□□ -1.54
CDX1P47902 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.41□□□□□ -1.54
CDX1P47902 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 AP005902.2-201ENST00000518393 307 ntBASIC5.41□□□□□ -1.54
CDX1P47902 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.41□□□□□ -1.54
CDX1P47902 OR7E154P-201ENST00000525174 932 ntBASIC5.41□□□□□ -1.54
CDX1P47902 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 AC016144.1-201ENST00000548175 1087 ntBASIC5.41□□□□□ -1.54
CDX1P47902 AL121839.1-201ENST00000556233 1185 ntBASIC5.41□□□□□ -1.54
CDX1P47902 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 ACTG1P15-201ENST00000570019 1063 ntBASIC5.41□□□□□ -1.54
CDX1P47902 AC023389.2-201ENST00000580031 955 ntBASIC5.41□□□□□ -1.54
CDX1P47902 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 AC245128.3-201ENST00000594721 748 ntBASIC5.41□□□□□ -1.54
CDX1P47902 U1.25-201ENST00000614085 162 ntBASIC5.41□□□□□ -1.54
CDX1P47902 U1.34-201ENST00000618578 162 ntBASIC5.41□□□□□ -1.54
CDX1P47902 U1.31-201ENST00000620022 160 ntBASIC5.41□□□□□ -1.54
CDX1P47902 AC017037.4-201ENST00000624526 826 ntBASIC5.41□□□□□ -1.54
CDX1P47902 AC099654.15-201ENST00000639802 509 ntBASIC5.41□□□□□ -1.54
CDX1P47902 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.41□□□□□ -1.54
CDX1P47902 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDX1P47902 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
CDX1P47902 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDX1P47902 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDX1P47902 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDX1P47902 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.4□□□□□ -1.54
CDX1P47902 TPTE2P2-201ENST00000403471 1466 ntBASIC5.4□□□□□ -1.54
CDX1P47902 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
CDX1P47902 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDX1P47902 AL355834.1-201ENST00000556602 3965 ntBASIC5.4□□□□□ -1.54
CDX1P47902 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDX1P47902 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.4□□□□□ -1.54
CDX1P47902 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDX1P47902 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDX1P47902 RN7SKP189-201ENST00000365042 330 ntBASIC5.4□□□□□ -1.54
CDX1P47902 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDX1P47902 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDX1P47902 RNA5SP176-201ENST00000390956 110 ntBASIC5.4□□□□□ -1.54
CDX1P47902 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.4□□□□□ -1.54
CDX1P47902 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC5.4□□□□□ -1.54
CDX1P47902 RN7SKP148-201ENST00000410179 275 ntBASIC5.4□□□□□ -1.54
CDX1P47902 RPS26P38-201ENST00000414476 348 ntBASIC5.4□□□□□ -1.54
CDX1P47902 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.4□□□□□ -1.54
CDX1P47902 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.4□□□□□ -1.54
CDX1P47902 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.4□□□□□ -1.54
CDX1P47902 LSM3P3-201ENST00000436601 306 ntBASIC5.4□□□□□ -1.54
CDX1P47902 NDUFA5P8-201ENST00000449019 346 ntBASIC5.4□□□□□ -1.54
CDX1P47902 RN7SL372P-201ENST00000461982 298 ntBASIC5.4□□□□□ -1.54
CDX1P47902 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.4□□□□□ -1.54
CDX1P47902 RN7SL259P-201ENST00000478499 253 ntBASIC5.4□□□□□ -1.54
CDX1P47902 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.4□□□□□ -1.54
CDX1P47902 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.4□□□□□ -1.54
CDX1P47902 RNU6-362P-201ENST00000516736 90 ntBASIC5.4□□□□□ -1.54
CDX1P47902 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms