Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSR1P43307 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.87□□□□□ -1.31
SSR1P43307 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.87□□□□□ -1.31
SSR1P43307 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SSR1P43307 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.87□□□□□ -1.31
SSR1P43307 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSR1P43307 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.87□□□□□ -1.31
SSR1P43307 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSR1P43307 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSR1P43307 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.87□□□□□ -1.31
SSR1P43307 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSR1P43307 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSR1P43307 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSR1P43307 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.87□□□□□ -1.31
SSR1P43307 PSMC1P4-201ENST00000515236 1327 ntBASIC6.87□□□□□ -1.31
SSR1P43307 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSR1P43307 AL023284.3-201ENST00000407767 334 ntBASIC6.87□□□□□ -1.31
SSR1P43307 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.87□□□□□ -1.31
SSR1P43307 AL929472.1-201ENST00000417484 429 ntBASIC6.87□□□□□ -1.31
SSR1P43307 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSR1P43307 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.87□□□□□ -1.31
SSR1P43307 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.87□□□□□ -1.31
SSR1P43307 RPL12P18-201ENST00000437175 325 ntBASIC6.87□□□□□ -1.31
SSR1P43307 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.87□□□□□ -1.31
SSR1P43307 AC099340.1-201ENST00000475247 599 ntBASIC6.87□□□□□ -1.31
SSR1P43307 RN7SL165P-201ENST00000477476 291 ntBASIC6.87□□□□□ -1.31
SSR1P43307 AC091965.3-201ENST00000506236 208 ntBASIC6.87□□□□□ -1.31
SSR1P43307 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.87□□□□□ -1.31
SSR1P43307 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.87□□□□□ -1.31
SSR1P43307 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.87□□□□□ -1.31
SSR1P43307 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.87□□□□□ -1.31
SSR1P43307 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.87□□□□□ -1.31
SSR1P43307 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.87□□□□□ -1.31
SSR1P43307 AP003115.1-201ENST00000569849 463 ntBASIC6.87□□□□□ -1.31
SSR1P43307 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSR1P43307 AL132640.3-201ENST00000630473 177 ntBASIC6.87□□□□□ -1.31
SSR1P43307 AC006453.3-201ENST00000635891 377 ntBASIC6.87□□□□□ -1.31
SSR1P43307 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.87□□□□□ -1.31
SSR1P43307 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSR1P43307 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SSR1P43307 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.87□□□□□ -1.31
SSR1P43307 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSR1P43307 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SSR1P43307 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.86□□□□□ -1.31
SSR1P43307 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
SSR1P43307 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
SSR1P43307 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.86□□□□□ -1.31
SSR1P43307 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 AC010132.4-201ENST00000569883 1368 ntBASIC6.86□□□□□ -1.31
SSR1P43307 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.86□□□□□ -1.31
SSR1P43307 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 NFU1P1-201ENST00000413128 774 ntBASIC6.86□□□□□ -1.31
SSR1P43307 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.86□□□□□ -1.31
SSR1P43307 AHCYP8-201ENST00000425108 209 ntBASIC6.86□□□□□ -1.31
SSR1P43307 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.86□□□□□ -1.31
SSR1P43307 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.86□□□□□ -1.31
SSR1P43307 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.86□□□□□ -1.31
SSR1P43307 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.86□□□□□ -1.31
SSR1P43307 SLAMF6P1-201ENST00000451067 602 ntBASIC6.86□□□□□ -1.31
SSR1P43307 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.86□□□□□ -1.31
SSR1P43307 RN7SKP198-201ENST00000459286 306 ntBASIC6.86□□□□□ -1.31
SSR1P43307 RN7SL72P-201ENST00000460697 269 ntBASIC6.86□□□□□ -1.31
SSR1P43307 RN7SL552P-201ENST00000462094 276 ntBASIC6.86□□□□□ -1.31
SSR1P43307 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 AC137549.1-201ENST00000514243 533 ntBASIC6.86□□□□□ -1.31
SSR1P43307 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.86□□□□□ -1.31
SSR1P43307 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.86□□□□□ -1.31
SSR1P43307 RN7SL208P-201ENST00000577964 296 ntBASIC6.86□□□□□ -1.31
SSR1P43307 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.86□□□□□ -1.31
SSR1P43307 AC091133.5-201ENST00000603088 301 ntBASIC6.86□□□□□ -1.31
SSR1P43307 SNORD96A-201ENST00000606577 79 ntBASIC6.86□□□□□ -1.31
SSR1P43307 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.86□□□□□ -1.31
SSR1P43307 AL109924.4-201ENST00000623089 670 ntBASIC6.86□□□□□ -1.31
SSR1P43307 AC073488.9-201ENST00000631601 754 ntBASIC6.86□□□□□ -1.31
SSR1P43307 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SSR1P43307 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.86□□□□□ -1.31
SSR1P43307 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.86□□□□□ -1.31
SSR1P43307 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSR1P43307 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.85□□□□□ -1.31
SSR1P43307 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSR1P43307 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.85□□□□□ -1.31
SSR1P43307 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms