Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 Z93929.1-201ENST00000418200 1475 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CNGA1P29973 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
CNGA1P29973 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CNGA1P29973 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
CNGA1P29973 MIR365B-201ENST00000362317 111 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 RNA5SP474-201ENST00000391234 90 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 RBBP4P5-201ENST00000398583 1266 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.7□□□□□ -1.18
CNGA1P29973 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 VN1R20P-201ENST00000425215 966 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 CYP4F32P-201ENST00000426492 504 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.7□□□□□ -1.18
CNGA1P29973 HSFY7P-201ENST00000432672 318 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC7.7□□□□□ -1.18
CNGA1P29973 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC7.7□□□□□ -1.18
CNGA1P29973 HSFY8P-201ENST00000437934 318 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 POU5F1P5-201ENST00000445059 658 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 RBMY3AP-201ENST00000449381 1145 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 AL034399.1-201ENST00000451535 380 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 HSFY5P-201ENST00000453726 309 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC7.7□□□□□ -1.18
CNGA1P29973 PSMA6P2-201ENST00000457574 686 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 RARRES2P3-201ENST00000457739 473 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 H3F3AP5-201ENST00000475267 429 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 RPS10P20-201ENST00000494130 463 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CNGA1P29973 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.7□□□□□ -1.18
CNGA1P29973 OR52K3P-201ENST00000531655 943 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.7□□□□□ -1.18
CNGA1P29973 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.7□□□□□ -1.18
CNGA1P29973 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.7□□□□□ -1.18
CNGA1P29973 AC023827.2-201ENST00000566880 1061 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CNGA1P29973 MIR4502-201ENST00000580432 81 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CNGA1P29973 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.7□□□□□ -1.18
CNGA1P29973 AL589765.6-201ENST00000601909 549 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.7□□□□□ -1.18
CNGA1P29973 PPATP2-201ENST00000605635 508 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.7□□□□□ -1.18
CNGA1P29973 AC022400.9-201ENST00000623633 273 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 SNX18P10-201ENST00000625014 519 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.7□□□□□ -1.18
CNGA1P29973 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.7□□□□□ -1.18
CNGA1P29973 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.7□□□□□ -1.18
CNGA1P29973 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.7□□□□□ -1.18
CNGA1P29973 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
CNGA1P29973 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.7□□□□□ -1.18
CNGA1P29973 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.7□□□□□ -1.18
CNGA1P29973 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.7□□□□□ -1.18
CNGA1P29973 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.7□□□□□ -1.18
CNGA1P29973 LINC01613-201ENST00000561476 2780 ntBASIC7.7□□□□□ -1.18
CNGA1P29973 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
CNGA1P29973 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.7□□□□□ -1.18
CNGA1P29973 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.7□□□□□ -1.18
CNGA1P29973 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.7□□□□□ -1.18
CNGA1P29973 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNGA1P29973 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CNGA1P29973 DDX6P1-205ENST00000441966 1436 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
CNGA1P29973 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CNGA1P29973 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CNGA1P29973 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CNGA1P29973 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
CNGA1P29973 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CNGA1P29973 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CNGA1P29973 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CNGA1P29973 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CNGA1P29973 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CNGA1P29973 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CNGA1P29973 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CNGA1P29973 RN7SKP62-201ENST00000384539 329 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.69□□□□□ -1.18
CNGA1P29973 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.69□□□□□ -1.18
CNGA1P29973 RAB9AP4-201ENST00000415230 609 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 AL360013.1-201ENST00000419031 858 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 AC073508.1-201ENST00000428866 656 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CNGA1P29973 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.69□□□□□ -1.18
CNGA1P29973 AC245047.1-201ENST00000433276 873 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.69□□□□□ -1.18
CNGA1P29973 ARL5AP3-201ENST00000439327 386 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 COL11A2P1-205ENST00000441798 676 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.69□□□□□ -1.18
CNGA1P29973 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.69□□□□□ -1.18
CNGA1P29973 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.69□□□□□ -1.18
CNGA1P29973 RN7SL39P-201ENST00000462264 297 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms