Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.32□□□□□ -1.24
COL4A5P29400 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
COL4A5P29400 AC117409.1-201ENST00000470499 1310 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 AL139415.1-201ENST00000424862 352 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 NIPA2P1-201ENST00000426223 976 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.32□□□□□ -1.24
COL4A5P29400 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
COL4A5P29400 RN7SL860P-201ENST00000473738 223 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 RN7SL184P-201ENST00000488308 297 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.32□□□□□ -1.24
COL4A5P29400 AC110056.1-201ENST00000525759 911 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.32□□□□□ -1.24
COL4A5P29400 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A5P29400 AL132640.3-201ENST00000630473 177 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A5P29400 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.31□□□□□ -1.24
COL4A5P29400 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
COL4A5P29400 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A5P29400 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A5P29400 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A5P29400 PDZK1P1-202ENST00000425209 1350 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A5P29400 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
COL4A5P29400 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.31□□□□□ -1.24
COL4A5P29400 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.31□□□□□ -1.24
COL4A5P29400 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.31□□□□□ -1.24
COL4A5P29400 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A5P29400 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.31□□□□□ -1.24
COL4A5P29400 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A5P29400 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A5P29400 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.31□□□□□ -1.24
COL4A5P29400 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
COL4A5P29400 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A5P29400 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.31□□□□□ -1.24
COL4A5P29400 AC025470.1-201ENST00000510053 2032 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 AP003972.1-201ENST00000625192 5446 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
COL4A5P29400 SELENOWP1-201ENST00000322792 252 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 RPL35AP24-201ENST00000413846 330 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 AL390119.1-201ENST00000440329 312 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.31□□□□□ -1.24
COL4A5P29400 AC007386.1-201ENST00000455212 582 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 AC231760.1-201ENST00000498002 260 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.31□□□□□ -1.24
COL4A5P29400 OR10G5P-201ENST00000532733 358 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 AC091078.2-201ENST00000557145 559 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.31□□□□□ -1.24
COL4A5P29400 AC015818.6-201ENST00000584274 634 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 AC092944.2-201ENST00000605443 889 ntBASIC7.31□□□□□ -1.24
COL4A5P29400 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A5P29400 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
COL4A5P29400 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
COL4A5P29400 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
COL4A5P29400 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A5P29400 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.3□□□□□ -1.24
COL4A5P29400 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
COL4A5P29400 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A5P29400 AL049634.1-201ENST00000453770 1720 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.3□□□□□ -1.24
COL4A5P29400 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
COL4A5P29400 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
COL4A5P29400 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A5P29400 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A5P29400 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
COL4A5P29400 RNU4-34P-201ENST00000410431 124 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 Y_RNA.625-201ENST00000411256 107 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.3□□□□□ -1.24
COL4A5P29400 AC126120.1-201ENST00000431082 470 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 AC023245.1-201ENST00000468501 517 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.3□□□□□ -1.24
COL4A5P29400 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A5P29400 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.3□□□□□ -1.24
COL4A5P29400 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.3□□□□□ -1.24
COL4A5P29400 AP001496.3-201ENST00000580230 913 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.3□□□□□ -1.24
COL4A5P29400 OR7A1P-201ENST00000601206 970 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 MIR7155-201ENST00000615925 56 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 AL691477.1-201ENST00000624398 162 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 AC116631.1-202ENST00000640984 683 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A5P29400 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A5P29400 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.3□□□□□ -1.24
COL4A5P29400 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
COL4A5P29400 AC127024.8-201ENST00000623719 2094 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A5P29400 AP001541.1-201ENST00000623322 1904 ntBASIC7.3□□□□□ -1.24
COL4A5P29400 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.29□□□□□ -1.24
COL4A5P29400 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
COL4A5P29400 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
COL4A5P29400 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.29□□□□□ -1.24
COL4A5P29400 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.29□□□□□ -1.24
COL4A5P29400 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A5P29400 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
COL4A5P29400 RN7SKP128-201ENST00000364270 303 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 RNU105B-201ENST00000364478 208 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms