Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
BDNFP23560 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
BDNFP23560 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.97□□□□□ -1.29
BDNFP23560 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
BDNFP23560 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
BDNFP23560 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.97□□□□□ -1.29
BDNFP23560 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
BDNFP23560 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.97□□□□□ -1.29
BDNFP23560 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
BDNFP23560 AL353625.1-202ENST00000366273 571 ntBASIC6.97□□□□□ -1.29
BDNFP23560 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
BDNFP23560 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
BDNFP23560 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.97□□□□□ -1.29
BDNFP23560 MRPS6P2-201ENST00000381143 370 ntBASIC6.97□□□□□ -1.29
BDNFP23560 RPL7P58-201ENST00000402913 758 ntBASIC6.97□□□□□ -1.29
BDNFP23560 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.97□□□□□ -1.29
BDNFP23560 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.97□□□□□ -1.29
BDNFP23560 RN7SKP129-201ENST00000410288 299 ntBASIC6.97□□□□□ -1.29
BDNFP23560 RN7SKP221-201ENST00000410420 301 ntBASIC6.97□□□□□ -1.29
BDNFP23560 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.97□□□□□ -1.29
BDNFP23560 MRPS21P5-201ENST00000417885 231 ntBASIC6.97□□□□□ -1.29
BDNFP23560 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
BDNFP23560 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.97□□□□□ -1.29
BDNFP23560 AL139184.1-202ENST00000422303 222 ntBASIC6.97□□□□□ -1.29
BDNFP23560 GPN3P1-201ENST00000423883 535 ntBASIC6.97□□□□□ -1.29
BDNFP23560 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.97□□□□□ -1.29
BDNFP23560 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.97□□□□□ -1.29
BDNFP23560 MTCO1P51-201ENST00000427672 1060 ntBASIC6.97□□□□□ -1.29
BDNFP23560 AL392003.1-201ENST00000434394 243 ntBASIC6.97□□□□□ -1.29
BDNFP23560 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.97□□□□□ -1.29
BDNFP23560 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.97□□□□□ -1.29
BDNFP23560 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.97□□□□□ -1.29
BDNFP23560 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
BDNFP23560 GAPDHP16-201ENST00000448152 962 ntBASIC6.97□□□□□ -1.29
BDNFP23560 MTND6P32-201ENST00000457611 483 ntBASIC6.97□□□□□ -1.29
BDNFP23560 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.97□□□□□ -1.29
BDNFP23560 AC117395.1-201ENST00000487390 403 ntBASIC6.97□□□□□ -1.29
BDNFP23560 AL117692.1-201ENST00000494283 713 ntBASIC6.97□□□□□ -1.29
BDNFP23560 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.97□□□□□ -1.29
BDNFP23560 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.97□□□□□ -1.29
BDNFP23560 GUSBP9-201ENST00000510138 584 ntBASIC6.97□□□□□ -1.29
BDNFP23560 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.97□□□□□ -1.29
BDNFP23560 RNA5SP116-201ENST00000516132 98 ntBASIC6.97□□□□□ -1.29
BDNFP23560 AC008676.3-201ENST00000521237 435 ntBASIC6.97□□□□□ -1.29
BDNFP23560 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.97□□□□□ -1.29
BDNFP23560 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.97□□□□□ -1.29
BDNFP23560 AP003033.2-201ENST00000528901 805 ntBASIC6.97□□□□□ -1.29
BDNFP23560 TDGP1-201ENST00000543961 1229 ntBASIC6.97□□□□□ -1.29
BDNFP23560 AC133552.4-201ENST00000576103 676 ntBASIC6.97□□□□□ -1.29
BDNFP23560 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.97□□□□□ -1.29
BDNFP23560 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.97□□□□□ -1.29
BDNFP23560 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
BDNFP23560 WBP1LP12-201ENST00000604449 331 ntBASIC6.97□□□□□ -1.29
BDNFP23560 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.97□□□□□ -1.29
BDNFP23560 AL159169.2-201ENST00000610061 1269 ntBASIC6.97□□□□□ -1.29
BDNFP23560 OR1N1-202ENST00000619659 939 ntBASIC6.97□□□□□ -1.29
BDNFP23560 AC018692.2-201ENST00000624130 348 ntBASIC6.97□□□□□ -1.29
BDNFP23560 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.97□□□□□ -1.29
BDNFP23560 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.97□□□□□ -1.29
BDNFP23560 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
BDNFP23560 AC023245.2-201ENST00000530760 2978 ntBASIC6.97□□□□□ -1.29
BDNFP23560 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
BDNFP23560 AC068870.3-201ENST00000625077 2536 ntBASIC6.97□□□□□ -1.29
BDNFP23560 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
BDNFP23560 SNX18P3-202ENST00000565670 1750 ntBASIC6.97□□□□□ -1.29
BDNFP23560 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.97□□□□□ -1.29
BDNFP23560 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
BDNFP23560 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
BDNFP23560 AC003985.2-201ENST00000562268 1669 ntBASIC6.96□□□□□ -1.29
BDNFP23560 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
BDNFP23560 AL596244.1-201ENST00000567068 3779 ntBASIC6.96□□□□□ -1.29
BDNFP23560 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
BDNFP23560 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
BDNFP23560 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.96□□□□□ -1.29
BDNFP23560 SMG1P7-201ENST00000565246 2704 ntBASIC6.96□□□□□ -1.29
BDNFP23560 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
BDNFP23560 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 RPL36P18-201ENST00000419316 318 ntBASIC6.96□□□□□ -1.3
BDNFP23560 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 REREP1Y-201ENST00000422655 198 ntBASIC6.96□□□□□ -1.3
BDNFP23560 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.96□□□□□ -1.3
BDNFP23560 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.96□□□□□ -1.3
BDNFP23560 ARMC4P1-201ENST00000438905 707 ntBASIC6.96□□□□□ -1.3
BDNFP23560 REREP2Y-201ENST00000439103 200 ntBASIC6.96□□□□□ -1.3
BDNFP23560 CEACAMP5-201ENST00000448037 961 ntBASIC6.96□□□□□ -1.3
BDNFP23560 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.96□□□□□ -1.3
BDNFP23560 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 SEPT7P3-201ENST00000455017 621 ntBASIC6.96□□□□□ -1.3
BDNFP23560 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.96□□□□□ -1.3
BDNFP23560 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.96□□□□□ -1.3
BDNFP23560 RPL19P11-201ENST00000495944 589 ntBASIC6.96□□□□□ -1.3
BDNFP23560 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 ASNSP4-201ENST00000511103 447 ntBASIC6.96□□□□□ -1.3
BDNFP23560 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.96□□□□□ -1.3
BDNFP23560 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.96□□□□□ -1.3
BDNFP23560 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.96□□□□□ -1.3
BDNFP23560 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms