Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MRPS21P5-201ENST00000417885 231 ntBASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC019080.2-201ENST00000453859 394 ntBASIC4.73□□□□□ -1.65
HLA-DQA1P01909 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 SNORA70.11-201ENST00000515987 138 ntBASIC4.73□□□□□ -1.65
HLA-DQA1P01909 SNORA70.13-201ENST00000516116 138 ntBASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 OR5M4P-201ENST00000529436 925 ntBASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC091304.4-201ENST00000565703 620 ntBASIC4.73□□□□□ -1.65
HLA-DQA1P01909 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC018558.4-201ENST00000622153 281 ntBASIC4.73□□□□□ -1.65
HLA-DQA1P01909 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC003992.1-201ENST00000635364 557 ntBASIC4.73□□□□□ -1.65
HLA-DQA1P01909 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC096921.2-201ENST00000561507 1916 ntBASIC4.73□□□□□ -1.65
HLA-DQA1P01909 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 RN7SKP55-201ENST00000364888 307 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 SNORA70.5-201ENST00000365519 135 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 NRIR-202ENST00000414795 506 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC013403.1-201ENST00000436954 263 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC019185.3-201ENST00000438805 323 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 RPL29P7-201ENST00000440227 457 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AL354714.5-201ENST00000450131 590 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 TUBBP11-201ENST00000472255 252 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 SCARNA18.2-201ENST00000516882 84 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 OXR1-212ENST00000521592 993 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AP003084.1-201ENST00000524828 742 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 OR4A43P-201ENST00000532938 908 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 PSMC1P8-201ENST00000536820 1296 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AL049779.3-201ENST00000557141 606 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC019322.1-201ENST00000571869 389 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 MIR3189-201ENST00000578735 73 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 MIR4786-201ENST00000583954 80 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 EXOSC3P2-201ENST00000594464 497 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC125494.2-201ENST00000602431 657 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms