Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 OR7E99P-201ENST00000505750 922 ntBASIC6.18□□□□□ -1.42
TNFP01375 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.18□□□□□ -1.42
TNFP01375 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TNFP01375 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.18□□□□□ -1.42
TNFP01375 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.18□□□□□ -1.42
TNFP01375 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.18□□□□□ -1.42
TNFP01375 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.18□□□□□ -1.42
TNFP01375 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.18□□□□□ -1.42
TNFP01375 AC092332.1-201ENST00000563684 829 ntBASIC6.18□□□□□ -1.42
TNFP01375 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.18□□□□□ -1.42
TNFP01375 AC007346.1-201ENST00000569208 867 ntBASIC6.18□□□□□ -1.42
TNFP01375 MIR4701-201ENST00000583094 63 ntBASIC6.18□□□□□ -1.42
TNFP01375 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.18□□□□□ -1.42
TNFP01375 AL138895.2-201ENST00000603019 178 ntBASIC6.18□□□□□ -1.42
TNFP01375 AC022400.9-201ENST00000623633 273 ntBASIC6.18□□□□□ -1.42
TNFP01375 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TNFP01375 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.18□□□□□ -1.42
TNFP01375 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TNFP01375 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
TNFP01375 LYARP1-201ENST00000436977 1501 ntBASIC6.18□□□□□ -1.42
TNFP01375 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.18□□□□□ -1.42
TNFP01375 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TNFP01375 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
TNFP01375 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TNFP01375 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.18□□□□□ -1.42
TNFP01375 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.18□□□□□ -1.42
TNFP01375 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.18□□□□□ -1.42
TNFP01375 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TNFP01375 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
TNFP01375 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TNFP01375 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TNFP01375 AC013488.1-201ENST00000526618 1838 ntBASIC6.18□□□□□ -1.42
TNFP01375 AC092725.2-201ENST00000567658 1389 ntBASIC6.18□□□□□ -1.42
TNFP01375 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TNFP01375 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
TNFP01375 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.17□□□□□ -1.42
TNFP01375 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
TNFP01375 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
TNFP01375 HSPD1P4-201ENST00000547203 1702 ntBASIC6.17□□□□□ -1.42
TNFP01375 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.17□□□□□ -1.42
TNFP01375 AC079807.1-201ENST00000429993 481 ntBASIC6.17□□□□□ -1.42
TNFP01375 PPIAP10-201ENST00000438675 458 ntBASIC6.17□□□□□ -1.42
TNFP01375 AC011742.2-201ENST00000443818 352 ntBASIC6.17□□□□□ -1.42
TNFP01375 RBMY2AP-201ENST00000445405 1157 ntBASIC6.17□□□□□ -1.42
TNFP01375 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.17□□□□□ -1.42
TNFP01375 RBMY2CP-201ENST00000448575 1157 ntBASIC6.17□□□□□ -1.42
TNFP01375 RBMY2DP-202ENST00000448881 1157 ntBASIC6.17□□□□□ -1.42
TNFP01375 RBMY2BP-202ENST00000451071 1156 ntBASIC6.17□□□□□ -1.42
TNFP01375 AC098847.1-201ENST00000473094 348 ntBASIC6.17□□□□□ -1.42
TNFP01375 RN7SKP35-201ENST00000517210 151 ntBASIC6.17□□□□□ -1.42
TNFP01375 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.17□□□□□ -1.42
TNFP01375 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.17□□□□□ -1.42
TNFP01375 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.17□□□□□ -1.42
TNFP01375 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.17□□□□□ -1.42
TNFP01375 AC020765.1-201ENST00000604296 328 ntBASIC6.17□□□□□ -1.42
TNFP01375 AC092266.1-201ENST00000610958 165 ntBASIC6.17□□□□□ -1.42
TNFP01375 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TNFP01375 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TNFP01375 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.17□□□□□ -1.42
TNFP01375 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.17□□□□□ -1.42
TNFP01375 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.17□□□□□ -1.42
TNFP01375 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.17□□□□□ -1.42
TNFP01375 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.17□□□□□ -1.42
TNFP01375 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TNFP01375 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.17□□□□□ -1.42
TNFP01375 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.17□□□□□ -1.42
TNFP01375 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.16□□□□□ -1.42
TNFP01375 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 NCOA4P3-201ENST00000513203 1877 ntBASIC6.16□□□□□ -1.42
TNFP01375 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.16□□□□□ -1.42
TNFP01375 RN7SKP275-201ENST00000364626 301 ntBASIC6.16□□□□□ -1.42
TNFP01375 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.16□□□□□ -1.42
TNFP01375 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.16□□□□□ -1.42
TNFP01375 AC009500.1-201ENST00000420684 583 ntBASIC6.16□□□□□ -1.42
TNFP01375 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms