Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ALDH1A1P00352 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
ALDH1A1P00352 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ALDH1A1P00352 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ALDH1A1P00352 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ALDH1A1P00352 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ALDH1A1P00352 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 ACTBP13-201ENST00000423971 3959 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 TCEA1P4-201ENST00000415066 844 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AP003385.1-201ENST00000426387 893 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC000111.3-201ENST00000433478 193 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC005099.1-201ENST00000442083 610 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 FAM92A1P2-202ENST00000504766 877 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC021146.7-201ENST00000509604 775 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC090835.1-201ENST00000515189 1024 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 OR4A21P-201ENST00000532759 944 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 MIR4800-201ENST00000537353 80 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AL352979.3-201ENST00000553515 247 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 AL442663.2-201ENST00000554385 511 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC011260.1-201ENST00000578420 472 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC097505.1-201ENST00000610199 565 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 USP12-203ENST00000620323 349 ntTSL 3 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC008443.7-201ENST00000622195 246 ntBASIC8.75□□□□□ -1.01
ALDH1A1P00352 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
ALDH1A1P00352 XIRP2-205ENST00000409605 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
ALDH1A1P00352 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ALDH1A1P00352 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 AC087359.1-201ENST00000508335 1740 ntBASIC8.74□□□□□ -1.01
ALDH1A1P00352 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ALDH1A1P00352 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ALDH1A1P00352 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
ALDH1A1P00352 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ALDH1A1P00352 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ALDH1A1P00352 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
ALDH1A1P00352 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ALDH1A1P00352 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.74□□□□□ -1.01
ALDH1A1P00352 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ALDH1A1P00352 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 AC245036.1-201ENST00000391727 309 ntBASIC8.74□□□□□ -1.01
ALDH1A1P00352 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ALDH1A1P00352 RN7SKP148-201ENST00000410179 275 ntBASIC8.74□□□□□ -1.01
ALDH1A1P00352 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 AC134879.1-201ENST00000426062 394 ntBASIC8.74□□□□□ -1.01
ALDH1A1P00352 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 NPM1P22-201ENST00000427761 952 ntBASIC8.74□□□□□ -1.01
ALDH1A1P00352 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 PUDPP2-201ENST00000431423 643 ntBASIC8.74□□□□□ -1.01
ALDH1A1P00352 AC013410.1-201ENST00000436223 1232 ntBASIC8.74□□□□□ -1.01
ALDH1A1P00352 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.74□□□□□ -1.01
ALDH1A1P00352 AC123904.1-201ENST00000441072 368 ntBASIC8.74□□□□□ -1.01
ALDH1A1P00352 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms