Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
ZIC3O60481 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
ZIC3O60481 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.83□□□□□ -1.48
ZIC3O60481 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.83□□□□□ -1.48
ZIC3O60481 AC104162.1-201ENST00000430831 2382 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 YWHAZP4-201ENST00000392459 708 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 PSMA6P1-201ENST00000400275 741 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 PRELID1P1-201ENST00000403549 660 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.83□□□□□ -1.48
ZIC3O60481 RNU2-72P-201ENST00000411175 163 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.83□□□□□ -1.48
ZIC3O60481 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.83□□□□□ -1.48
ZIC3O60481 BMP6P1-201ENST00000431230 679 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 NDUFA5P1-201ENST00000433858 341 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.83□□□□□ -1.48
ZIC3O60481 AC091965.3-201ENST00000506236 208 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.83□□□□□ -1.48
ZIC3O60481 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AC084337.1-201ENST00000524809 686 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.83□□□□□ -1.48
ZIC3O60481 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.83□□□□□ -1.48
ZIC3O60481 OR4A41P-201ENST00000533053 928 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.83□□□□□ -1.48
ZIC3O60481 AC025423.2-201ENST00000537570 439 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AC121758.1-202ENST00000556917 658 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.83□□□□□ -1.48
ZIC3O60481 AL078623.1-201ENST00000602702 907 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AC097467.4-201ENST00000605504 141 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.83□□□□□ -1.48
ZIC3O60481 AC009779.8-202ENST00000607990 932 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AC008833.1-201ENST00000611633 691 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AL122023.1-201ENST00000622847 530 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.83□□□□□ -1.48
ZIC3O60481 AC010325.3-201ENST00000641084 394 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ZIC3O60481 AL353763.1-201ENST00000624467 1628 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
ZIC3O60481 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC5.83□□□□□ -1.48
ZIC3O60481 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
ZIC3O60481 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.83□□□□□ -1.48
ZIC3O60481 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.83□□□□□ -1.48
ZIC3O60481 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZIC3O60481 THAP12P8-201ENST00000447914 2115 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.83□□□□□ -1.48
ZIC3O60481 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.83□□□□□ -1.48
ZIC3O60481 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.82□□□□□ -1.48
ZIC3O60481 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
ZIC3O60481 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.82□□□□□ -1.48
ZIC3O60481 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
ZIC3O60481 RNU6-564P-201ENST00000410983 104 ntBASIC5.82□□□□□ -1.48
ZIC3O60481 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC5.82□□□□□ -1.48
ZIC3O60481 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 AP000949.1-201ENST00000438328 629 ntBASIC5.82□□□□□ -1.48
ZIC3O60481 GTF2IP14-201ENST00000441415 586 ntBASIC5.82□□□□□ -1.48
ZIC3O60481 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 DEFB109A-201ENST00000482450 265 ntBASIC5.82□□□□□ -1.48
ZIC3O60481 GM2AP2-201ENST00000491764 562 ntBASIC5.82□□□□□ -1.48
ZIC3O60481 AC106822.1-201ENST00000502647 526 ntBASIC5.82□□□□□ -1.48
ZIC3O60481 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.82□□□□□ -1.48
ZIC3O60481 MTND1P36-201ENST00000522384 936 ntBASIC5.82□□□□□ -1.48
ZIC3O60481 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.82□□□□□ -1.48
ZIC3O60481 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 AP002345.2-201ENST00000609961 904 ntBASIC5.82□□□□□ -1.48
ZIC3O60481 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.82□□□□□ -1.48
ZIC3O60481 AL138960.2-201ENST00000625145 535 ntBASIC5.82□□□□□ -1.48
ZIC3O60481 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
ZIC3O60481 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms