Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM38O00635 AC093816.1-201ENST00000515076 913 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM38O00635 EEF1B2P2-201ENST00000519625 676 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM38O00635 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.72□□□□□ -1.33
TRIM38O00635 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM38O00635 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.72□□□□□ -1.33
TRIM38O00635 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TRIM38O00635 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM38O00635 MIR4271-201ENST00000582451 67 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM38O00635 AC012368.3-201ENST00000604190 219 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 AC005014.3-201ENST00000605985 190 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM38O00635 uc_338.29-201ENST00000615099 168 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM38O00635 WBP1LP8-201ENST00000617401 327 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM38O00635 AC089999.3-201ENST00000622440 577 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 AC020923.1-201ENST00000624021 917 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 AL356094.1-201ENST00000624663 1212 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 AL512329.1-201ENST00000404600 1592 ntBASIC6.72□□□□□ -1.33
TRIM38O00635 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM38O00635 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
TRIM38O00635 AC122713.2-201ENST00000624942 3335 ntBASIC6.71□□□□□ -1.33
TRIM38O00635 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
TRIM38O00635 AC129502.1-201ENST00000623261 1654 ntBASIC6.71□□□□□ -1.33
TRIM38O00635 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
TRIM38O00635 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
TRIM38O00635 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TRIM38O00635 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
TRIM38O00635 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.71□□□□□ -1.34
TRIM38O00635 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM38O00635 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM38O00635 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
TRIM38O00635 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM38O00635 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
TRIM38O00635 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM38O00635 OFD1P17-201ENST00000437639 3018 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TRIM38O00635 AL590635.1-201ENST00000406314 586 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
TRIM38O00635 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM38O00635 AC017019.1-201ENST00000426129 261 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 VN1R53P-201ENST00000429536 957 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TRIM38O00635 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM38O00635 RAB9AP5-201ENST00000437794 597 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 GAPDHP37-201ENST00000442317 968 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 RAB9AP2-201ENST00000443911 597 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.71□□□□□ -1.34
TRIM38O00635 NMNAT1P3-201ENST00000457517 888 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM38O00635 AC115223.1-201ENST00000466377 870 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 RWDD4P1-201ENST00000488019 565 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 RNA5SP318-201ENST00000516352 92 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 RN7SKP70-201ENST00000516655 271 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM38O00635 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.71□□□□□ -1.34
TRIM38O00635 NXPE2P1-201ENST00000543705 726 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM38O00635 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
TRIM38O00635 AC092375.1-201ENST00000550410 637 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.71□□□□□ -1.34
TRIM38O00635 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
TRIM38O00635 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM38O00635 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM38O00635 AC122134.1-202ENST00000569111 1201 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.71□□□□□ -1.34
TRIM38O00635 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.71□□□□□ -1.34
TRIM38O00635 AC006328.2-201ENST00000623198 397 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 AC012005.2-201ENST00000624333 397 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 AC061999.1-201ENST00000624454 177 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 AP000720.1-201ENST00000625091 483 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM38O00635 AL163152.1-201ENST00000642001 374 ntBASIC6.71□□□□□ -1.34
TRIM38O00635 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM38O00635 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM38O00635 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.71□□□□□ -1.34
TRIM38O00635 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM38O00635 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM38O00635 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM38O00635 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
TRIM38O00635 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 AC005261.6-201ENST00000623072 1387 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM38O00635 AC005618.1-201ENST00000606901 3148 ntBASIC6.7□□□□□ -1.34
TRIM38O00635 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms