Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GTF3AP6-201ENST00000432585 986 ntBASIC6.8□□□□□ -1.32
O00370 RPSAP41-201ENST00000439695 860 ntBASIC6.8□□□□□ -1.32
O00370 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.8□□□□□ -1.32
O00370 AC245291.3-201ENST00000443400 292 ntBASIC6.8□□□□□ -1.32
O00370 COX4I1P2-201ENST00000447446 547 ntBASIC6.8□□□□□ -1.32
O00370 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
O00370 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.8□□□□□ -1.32
O00370 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
O00370 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
O00370 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.8□□□□□ -1.32
O00370 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
O00370 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.8□□□□□ -1.32
O00370 RNA5SP418-201ENST00000515951 117 ntBASIC6.8□□□□□ -1.32
O00370 RNU6-964P-201ENST00000516524 69 ntBASIC6.8□□□□□ -1.32
O00370 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.8□□□□□ -1.32
O00370 COX6B1P4-201ENST00000519826 484 ntBASIC6.8□□□□□ -1.32
O00370 AC135983.3-201ENST00000528049 1226 ntBASIC6.8□□□□□ -1.32
O00370 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.8□□□□□ -1.32
O00370 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.8□□□□□ -1.32
O00370 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.8□□□□□ -1.32
O00370 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.8□□□□□ -1.32
O00370 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.8□□□□□ -1.32
O00370 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.8□□□□□ -1.32
O00370 AC063977.7-201ENST00000594454 337 ntBASIC6.8□□□□□ -1.32
O00370 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.8□□□□□ -1.32
O00370 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.8□□□□□ -1.32
O00370 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
O00370 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
O00370 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.8□□□□□ -1.32
O00370 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
O00370 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
O00370 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
O00370 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
O00370 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
O00370 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
O00370 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
O00370 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
O00370 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
O00370 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.79□□□□□ -1.32
O00370 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.79□□□□□ -1.32
O00370 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
O00370 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
O00370 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.79□□□□□ -1.32
O00370 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.79□□□□□ -1.32
O00370 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
O00370 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 RN7SKP184-201ENST00000362348 333 ntBASIC6.79□□□□□ -1.32
O00370 SNORD16-201ENST00000362803 99 ntBASIC6.79□□□□□ -1.32
O00370 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.79□□□□□ -1.32
O00370 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 RN7SKP38-201ENST00000410782 309 ntBASIC6.79□□□□□ -1.32
O00370 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.79□□□□□ -1.32
O00370 AL360013.1-201ENST00000419031 858 ntBASIC6.79□□□□□ -1.32
O00370 RPL34P27-201ENST00000428810 349 ntBASIC6.79□□□□□ -1.32
O00370 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.79□□□□□ -1.32
O00370 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.79□□□□□ -1.32
O00370 GTF2IP14-201ENST00000441415 586 ntBASIC6.79□□□□□ -1.32
O00370 AC234771.2-201ENST00000445718 597 ntBASIC6.79□□□□□ -1.32
O00370 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 KF459542.1-201ENST00000450908 553 ntBASIC6.79□□□□□ -1.32
O00370 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.79□□□□□ -1.32
O00370 RPS7P10-201ENST00000464254 603 ntBASIC6.79□□□□□ -1.32
O00370 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.79□□□□□ -1.32
O00370 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.79□□□□□ -1.32
O00370 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.79□□□□□ -1.32
O00370 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.79□□□□□ -1.32
O00370 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.79□□□□□ -1.32
O00370 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.79□□□□□ -1.32
O00370 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.79□□□□□ -1.32
O00370 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.79□□□□□ -1.32
O00370 AC012368.3-201ENST00000604190 219 ntBASIC6.79□□□□□ -1.32
O00370 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.79□□□□□ -1.32
O00370 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.79□□□□□ -1.32
O00370 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.79□□□□□ -1.32
O00370 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.79□□□□□ -1.32
O00370 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.79□□□□□ -1.32
O00370 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.79□□□□□ -1.32
O00370 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
O00370 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
O00370 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
O00370 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
O00370 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.78□□□□□ -1.32
O00370 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
O00370 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.78□□□□□ -1.32
O00370 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.78□□□□□ -1.32
O00370 AC125238.2-201ENST00000430003 1440 ntBASIC6.78□□□□□ -1.32
O00370 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.78□□□□□ -1.32
O00370 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
O00370 RNA5SP350-201ENST00000363298 111 ntBASIC6.78□□□□□ -1.32
O00370 AC003045.1-201ENST00000398779 713 ntBASIC6.78□□□□□ -1.32
O00370 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms