Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
UPK1AO00322 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
UPK1AO00322 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
UPK1AO00322 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
UPK1AO00322 AC217777.1-201ENST00000570034 1471 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.96□□□□□ -1.46
UPK1AO00322 USP9YP3-201ENST00000434481 1766 ntBASIC5.95□□□□□ -1.46
UPK1AO00322 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
UPK1AO00322 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.95□□□□□ -1.46
UPK1AO00322 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.95□□□□□ -1.46
UPK1AO00322 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 AL033543.1-201ENST00000623440 13454 ntBASIC5.95□□□□□ -1.46
UPK1AO00322 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
UPK1AO00322 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.95□□□□□ -1.46
UPK1AO00322 UBE2V1P14-201ENST00000415815 558 ntBASIC5.95□□□□□ -1.46
UPK1AO00322 OR6R1P-201ENST00000431838 940 ntBASIC5.95□□□□□ -1.46
UPK1AO00322 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.95□□□□□ -1.46
UPK1AO00322 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.95□□□□□ -1.46
UPK1AO00322 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.95□□□□□ -1.46
UPK1AO00322 PA2G4P1-201ENST00000442248 1197 ntBASIC5.95□□□□□ -1.46
UPK1AO00322 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.95□□□□□ -1.46
UPK1AO00322 snoU13.29-201ENST00000459370 104 ntBASIC5.95□□□□□ -1.46
UPK1AO00322 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.95□□□□□ -1.46
UPK1AO00322 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.95□□□□□ -1.46
UPK1AO00322 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
UPK1AO00322 GLYATL1P2-202ENST00000588046 902 ntBASIC5.95□□□□□ -1.46
UPK1AO00322 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 ZNF402P-201ENST00000404435 3100 ntBASIC5.95□□□□□ -1.46
UPK1AO00322 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
UPK1AO00322 AL121768.1-201ENST00000613917 2544 ntBASIC5.95□□□□□ -1.46
UPK1AO00322 AC092646.2-201ENST00000431242 2095 ntBASIC5.95□□□□□ -1.46
UPK1AO00322 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 AL359976.1-201ENST00000418655 3528 ntBASIC5.95□□□□□ -1.46
UPK1AO00322 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPK1AO00322 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
UPK1AO00322 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
UPK1AO00322 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
UPK1AO00322 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
UPK1AO00322 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.94□□□□□ -1.46
UPK1AO00322 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
UPK1AO00322 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.94□□□□□ -1.46
UPK1AO00322 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
UPK1AO00322 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UPK1AO00322 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.94□□□□□ -1.46
UPK1AO00322 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.94□□□□□ -1.46
UPK1AO00322 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.94□□□□□ -1.46
UPK1AO00322 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.94□□□□□ -1.46
UPK1AO00322 GPN3P1-201ENST00000423883 535 ntBASIC5.94□□□□□ -1.46
UPK1AO00322 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.94□□□□□ -1.46
UPK1AO00322 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UPK1AO00322 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.94□□□□□ -1.46
UPK1AO00322 SUMO2P10-201ENST00000452006 288 ntBASIC5.94□□□□□ -1.46
UPK1AO00322 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.94□□□□□ -1.46
UPK1AO00322 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
UPK1AO00322 OR9A1P-202ENST00000484361 945 ntBASIC5.94□□□□□ -1.46
UPK1AO00322 RNA5SP418-201ENST00000515951 117 ntBASIC5.94□□□□□ -1.46
UPK1AO00322 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.94□□□□□ -1.46
UPK1AO00322 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.94□□□□□ -1.46
UPK1AO00322 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.94□□□□□ -1.46
UPK1AO00322 AC037479.1-201ENST00000558361 625 ntBASIC5.94□□□□□ -1.46
UPK1AO00322 AC009120.3-201ENST00000563335 499 ntBASIC5.94□□□□□ -1.46
UPK1AO00322 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.94□□□□□ -1.46
UPK1AO00322 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UPK1AO00322 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.94□□□□□ -1.46
UPK1AO00322 AC005899.6-201ENST00000620729 297 ntBASIC5.94□□□□□ -1.46
UPK1AO00322 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.94□□□□□ -1.46
UPK1AO00322 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.94□□□□□ -1.46
UPK1AO00322 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.94□□□□□ -1.46
UPK1AO00322 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.94□□□□□ -1.46
UPK1AO00322 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.94□□□□□ -1.46
UPK1AO00322 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.94□□□□□ -1.46
UPK1AO00322 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.94□□□□□ -1.46
UPK1AO00322 GUCY1B2-204ENST00000531898 1979 ntBASIC5.94□□□□□ -1.46
UPK1AO00322 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
UPK1AO00322 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UPK1AO00322 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.94□□□□□ -1.46
UPK1AO00322 AC027575.3-201ENST00000583058 2747 ntBASIC5.94□□□□□ -1.46
UPK1AO00322 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UPK1AO00322 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UPK1AO00322 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UPK1AO00322 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
UPK1AO00322 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.93□□□□□ -1.46
UPK1AO00322 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.93□□□□□ -1.46
UPK1AO00322 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UPK1AO00322 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.93□□□□□ -1.46
UPK1AO00322 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms