Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL139220.2-211ENST00000628234 754 ntTSL 5 BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 AC244258.1-201ENST00000637553 1071 ntBASIC6.6□□□□□ -1.35
SHISA3A0PJX4 TTC39DP-201ENST00000416781 1688 ntBASIC6.6□□□□□ -1.35
SHISA3A0PJX4 AP000776.1-201ENST00000530032 1663 ntBASIC6.6□□□□□ -1.35
SHISA3A0PJX4 LPAL2-203ENST00000454031 2498 ntBASIC6.6□□□□□ -1.35
SHISA3A0PJX4 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHISA3A0PJX4 AC000367.1-201ENST00000452711 1766 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC241584.2-201ENST00000637142 2090 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 DCLRE1C-209ENST00000378278 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 MFSD1P1-201ENST00000576210 1327 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC073055.1-201ENST00000456901 1621 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 RNU6-560P-201ENST00000364007 108 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 MIR575-201ENST00000385013 94 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 MIR1204-201ENST00000408388 67 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 RNU6-920P-201ENST00000410926 92 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 USP9YP33-201ENST00000412220 421 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 OR8G2P-201ENST00000412796 908 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AL139421.1-201ENST00000423010 169 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 OFD1P13Y-201ENST00000431179 1232 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AL355149.1-201ENST00000438396 882 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC239367.1-201ENST00000439389 936 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 GTF3AP5-201ENST00000442645 697 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC023512.1-201ENST00000444513 499 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 RPL5P32-201ENST00000454085 879 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC096915.1-201ENST00000456185 512 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 NUTF2P4-201ENST00000458353 381 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 RPS20P23-201ENST00000461683 354 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 RN7SL740P-201ENST00000467060 344 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 SETP11-201ENST00000473027 690 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 HNRNPKP5-201ENST00000515300 253 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 MTND6P20-201ENST00000522986 418 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 OR8G3P-201ENST00000533406 921 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 OR11J5P-201ENST00000556889 934 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC138749.2-201ENST00000566048 167 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC079171.1-201ENST00000568788 914 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 RN7SL785P-201ENST00000578437 253 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC022146.1-201ENST00000595307 847 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AP003973.1-201ENST00000604639 691 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AF250324.2-201ENST00000608299 610 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AC093635.1-201ENST00000609028 555 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AL022324.3-201ENST00000609330 747 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 CGA-202ENST00000610310 615 ntTSL 3 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AL139418.1-201ENST00000613613 177 ntBASIC6.59□□□□□ -1.35
SHISA3A0PJX4 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.59□□□□□ -1.35
SHISA3A0PJX4 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms