Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC027229.1-201ENST00000583887 253 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AL589863.1-201ENST00000595383 631 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AC091948.2-201ENST00000636510 279 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AC092724.1-201ENST00000624623 3397 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AL121768.1-201ENST00000613917 2544 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC010894.1-201ENST00000313760 361 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 OR7E25P-201ENST00000344844 931 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 RNU1-84P-201ENST00000365447 164 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 MIR431-201ENST00000385266 114 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 RNU11-6P-201ENST00000391127 133 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 MTND4LP17-201ENST00000414607 293 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 H3F3BP1-201ENST00000440551 403 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 SLAMF6P1-201ENST00000451067 602 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AP004607.5-201ENST00000532034 217 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 KATNBL1P1-201ENST00000605192 748 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC092953.2-201ENST00000608000 699 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 MIR7854-201ENST00000620068 65 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AC027506.1-201ENST00000621395 198 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 SHQ1P1-201ENST00000437111 1544 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 IMMTP1-201ENST00000435590 2219 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 AP004289.1-201ENST00000436307 2205 ntBASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
TCRBV7S3A2A0A539 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 ZNF658B-201ENST00000602828 3408 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AL139805.2-201ENST00000455305 2433 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 OR11H13P-201ENST00000359695 979 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 SNORD16-201ENST00000362803 99 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 MIR433-201ENST00000384837 93 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 BMP6P1-201ENST00000431230 679 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 OR13K1P-201ENST00000444577 975 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 TREML3P-201ENST00000457327 501 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 HMGN1P8-201ENST00000463578 288 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 RNA5SP75-201ENST00000516841 111 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 OR9G2P-201ENST00000533326 880 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AC023080.1-201ENST00000551663 931 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms