Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 NIFKP9-201ENST00000419265 221 ntBASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
CSNK1G3Q9Y6M4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 UNC93B2-201ENST00000285383 730 ntBASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK1G3Q9Y6M4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 RBM17P1-201ENST00000453646 1190 ntBASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 AC116562.2-201ENST00000507042 360 ntBASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 AC010331.1-201ENST00000611423 582 ntBASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 REXO1L10P-201ENST00000615707 1290 ntBASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CSNK1G3Q9Y6M4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 KRT16P1-201ENST00000399124 1418 ntBASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 AC006128.1-201ENST00000624704 1661 ntBASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK1G3Q9Y6M4 AP006587.1-201ENST00000534129 1502 ntBASIC19.35■□□□□ 0.69
CSNK1G3Q9Y6M4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1G3Q9Y6M4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.35■□□□□ 0.69
CSNK1G3Q9Y6M4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1G3Q9Y6M4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.35■□□□□ 0.69
CSNK1G3Q9Y6M4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1G3Q9Y6M4 KRT16P6-202ENST00000425692 1426 ntBASIC19.35■□□□□ 0.69
CSNK1G3Q9Y6M4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1G3Q9Y6M4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK1G3Q9Y6M4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms