Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3AQ9Y6K1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3AQ9Y6K1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.42■□□□□ 0.7
DNMT3AQ9Y6K1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3AQ9Y6K1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3AQ9Y6K1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 NBPF21P-201ENST00000425093 1451 ntBASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
DNMT3AQ9Y6K1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 KRASP1-201ENST00000407852 552 ntBASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 FAM197Y4-202ENST00000622692 608 ntBASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3AQ9Y6K1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DNMT3AQ9Y6K1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.39■□□□□ 0.7
DNMT3AQ9Y6K1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DNMT3AQ9Y6K1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.39■□□□□ 0.7
DNMT3AQ9Y6K1 AC099778.1-201ENST00000568593 1911 ntBASIC19.39■□□□□ 0.7
DNMT3AQ9Y6K1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 AC004264.1-201ENST00000608354 794 ntBASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 AP006587.1-201ENST00000534129 1502 ntBASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 AC009237.14-201ENST00000609975 1594 ntBASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 AL157384.1-201ENST00000445995 2473 ntBASIC19.39■□□□□ 0.69
DNMT3AQ9Y6K1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 AL158047.1-201ENST00000445918 881 ntBASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms