Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC6Q9Y625 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
GPC6Q9Y625 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
GPC6Q9Y625 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC6Q9Y625 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC6Q9Y625 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.68■□□□□ 0.58
GPC6Q9Y625 AC068338.2-201ENST00000563278 1430 ntBASIC18.68■□□□□ 0.58
GPC6Q9Y625 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GPC6Q9Y625 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GPC6Q9Y625 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC6Q9Y625 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC6Q9Y625 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GPC6Q9Y625 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.68■□□□□ 0.58
GPC6Q9Y625 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC6Q9Y625 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
GPC6Q9Y625 CYP21A1P-202ENST00000354927 1481 ntBASIC18.68■□□□□ 0.58
GPC6Q9Y625 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC6Q9Y625 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GPC6Q9Y625 AL691432.2-201ENST00000607222 2038 ntBASIC18.67■□□□□ 0.58
GPC6Q9Y625 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.67■□□□□ 0.58
GPC6Q9Y625 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC6Q9Y625 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPC6Q9Y625 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC6Q9Y625 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPC6Q9Y625 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC6Q9Y625 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPC6Q9Y625 AC125437.2-201ENST00000625180 2167 ntBASIC18.67■□□□□ 0.58
GPC6Q9Y625 CDCA4P2-201ENST00000441182 718 ntBASIC18.67■□□□□ 0.58
GPC6Q9Y625 AC026185.1-201ENST00000445748 174 ntBASIC18.67■□□□□ 0.58
GPC6Q9Y625 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.67■□□□□ 0.58
GPC6Q9Y625 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GPC6Q9Y625 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.67■□□□□ 0.58
GPC6Q9Y625 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.67■□□□□ 0.58
GPC6Q9Y625 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.67■□□□□ 0.58
GPC6Q9Y625 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC6Q9Y625 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.67■□□□□ 0.58
GPC6Q9Y625 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC6Q9Y625 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC6Q9Y625 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC6Q9Y625 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GPC6Q9Y625 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.66■□□□□ 0.58
GPC6Q9Y625 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC6Q9Y625 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC6Q9Y625 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
GPC6Q9Y625 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
GPC6Q9Y625 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.66■□□□□ 0.58
GPC6Q9Y625 AC069236.1-201ENST00000604339 616 ntBASIC18.66■□□□□ 0.58
GPC6Q9Y625 AC008694.1-202ENST00000636953 945 ntBASIC18.66■□□□□ 0.58
GPC6Q9Y625 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
GPC6Q9Y625 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC6Q9Y625 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.66■□□□□ 0.58
GPC6Q9Y625 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.66■□□□□ 0.58
GPC6Q9Y625 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
GPC6Q9Y625 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC6Q9Y625 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.66■□□□□ 0.58
GPC6Q9Y625 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC6Q9Y625 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC6Q9Y625 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC6Q9Y625 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC6Q9Y625 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC6Q9Y625 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC6Q9Y625 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC6Q9Y625 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 AC005181.1-201ENST00000604782 1256 ntBASIC18.65■□□□□ 0.58
GPC6Q9Y625 AC016405.3-201ENST00000607710 860 ntBASIC18.65■□□□□ 0.58
GPC6Q9Y625 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GPC6Q9Y625 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC6Q9Y625 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC6Q9Y625 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC6Q9Y625 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC6Q9Y625 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC6Q9Y625 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC6Q9Y625 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.65■□□□□ 0.58
GPC6Q9Y625 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
GPC6Q9Y625 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GPC6Q9Y625 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
GPC6Q9Y625 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GPC6Q9Y625 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GPC6Q9Y625 TMEM179-206ENST00000616017 1645 ntBASIC18.64■□□□□ 0.57
GPC6Q9Y625 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC6Q9Y625 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC6Q9Y625 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
GPC6Q9Y625 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC6Q9Y625 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC6Q9Y625 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GPC6Q9Y625 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.64■□□□□ 0.57
GPC6Q9Y625 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.64■□□□□ 0.57
GPC6Q9Y625 CYP2T1P-201ENST00000432607 1285 ntBASIC18.64■□□□□ 0.57
GPC6Q9Y625 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GPC6Q9Y625 RAP2CP1-201ENST00000605103 478 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms