Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AL049812.1-201ENST00000432563 2267 ntBASIC22.56■■□□□ 1.2
R3HCC1Q9Y3T6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
R3HCC1Q9Y3T6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
R3HCC1Q9Y3T6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 AC245052.3-201ENST00000450182 901 ntBASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
R3HCC1Q9Y3T6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 AC005332.7-201ENST00000614046 2005 ntBASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 MFSD11-216ENST00000590393 1141 ntBASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 AC010536.3-201ENST00000620306 533 ntBASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
R3HCC1Q9Y3T6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.53■■□□□ 1.2
R3HCC1Q9Y3T6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 AC231657.2-201ENST00000624556 255 ntBASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3HCC1Q9Y3T6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
R3HCC1Q9Y3T6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.19
R3HCC1Q9Y3T6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
R3HCC1Q9Y3T6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 TERF1P5-201ENST00000477545 1207 ntBASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
R3HCC1Q9Y3T6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms