Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 KRT18P68-201ENST00000392293 1000 ntBASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 AL355472.2-201ENST00000422958 438 ntBASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 OR10C1-204ENST00000622521 1039 ntBASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 AC098818.2-201ENST00000564925 2320 ntBASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RHBDD3Q9Y3P4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 CDCA4P2-201ENST00000441182 718 ntBASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 CYP2T3P-201ENST00000601990 817 ntBASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 AL020996.1-203ENST00000536896 2307 ntBASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDD3Q9Y3P4 AC010980.2-201ENST00000587099 1412 ntBASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 AC093787.1-201ENST00000450396 207 ntBASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHBDD3Q9Y3P4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RHBDD3Q9Y3P4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms