Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 AC018553.1-201ENST00000616682 1458 ntBASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 BX119927.1-201ENST00000636596 1552 ntBASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 PHGDH-210ENST00000641115 1638 ntBASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 AP006587.1-201ENST00000534129 1502 ntBASIC17.62■□□□□ 0.41
CLCF1Q9UBD9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 MIR4785-201ENST00000585005 73 ntBASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 KRT17P2-201ENST00000300992 1314 ntBASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCF1Q9UBD9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 AL353708.3-201ENST00000610272 989 ntBASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 AC073314.1-201ENST00000568729 2216 ntBASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLCF1Q9UBD9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCF1Q9UBD9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms