Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PPP4R2Q9NY27 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PPP4R2Q9NY27 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC25.35■■□□□ 1.65
PPP4R2Q9NY27 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PPP4R2Q9NY27 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.35■■□□□ 1.65
PPP4R2Q9NY27 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC25.35■■□□□ 1.65
PPP4R2Q9NY27 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.35■■□□□ 1.65
PPP4R2Q9NY27 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 DUX4L2-201ENST00000561772 1275 ntBASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 DUX4L6-201ENST00000626483 1275 ntBASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 DUX4L1-201ENST00000627662 1275 ntBASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 DUX4L8-201ENST00000629013 1275 ntBASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 DUX4L3-201ENST00000630187 1275 ntBASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 DUX4L7-201ENST00000630678 1275 ntBASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 DUX4L5-201ENST00000630834 1275 ntBASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.34■■□□□ 1.65
PPP4R2Q9NY27 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 AC105265.2-201ENST00000467189 838 ntBASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 AL356652.1-201ENST00000615962 565 ntBASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 AP001271.2-201ENST00000624018 1556 ntBASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 AR-207ENST00000612010 3896 ntTSL 5 BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 AC079598.2-202ENST00000546624 1451 ntBASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.33■■□□□ 1.65
PPP4R2Q9NY27 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
PPP4R2Q9NY27 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PPP4R2Q9NY27 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 AP001330.3-201ENST00000520123 633 ntBASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 AL354811.1-201ENST00000610286 706 ntBASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R2Q9NY27 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 AL161938.1-201ENST00000569833 2180 ntBASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R2Q9NY27 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 KRT8P17-201ENST00000453110 1448 ntBASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 RASA4CP-201ENST00000424092 1398 ntBASIC25.3■■□□□ 1.64
PPP4R2Q9NY27 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms