Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC026471.1-201ENST00000564629 3026 ntBASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCM2LQ9NUG4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 LETM1P2-201ENST00000597330 2178 ntBASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCM2LQ9NUG4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 LINC01465-201ENST00000408887 1940 ntBASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 AL032819.2-201ENST00000624543 2162 ntBASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 KRT18P11-201ENST00000435214 1283 ntBASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2LQ9NUG4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.77■□□□□ 0.59
CCM2LQ9NUG4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCM2LQ9NUG4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.77■□□□□ 0.59
CCM2LQ9NUG4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 KRT18P6-201ENST00000555540 1265 ntBASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 AC142086.2-201ENST00000569753 217 ntBASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms