Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CISHQ9NSE2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.15■□□□□ 0.98
CISHQ9NSE2 AFG3L1P-217ENST00000557444 2447 ntBASIC21.15■□□□□ 0.98
CISHQ9NSE2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CISHQ9NSE2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.15■□□□□ 0.98
CISHQ9NSE2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CISHQ9NSE2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CISHQ9NSE2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.14■□□□□ 0.98
CISHQ9NSE2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.14■□□□□ 0.98
CISHQ9NSE2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CISHQ9NSE2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CISHQ9NSE2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.14■□□□□ 0.97
CISHQ9NSE2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.14■□□□□ 0.97
CISHQ9NSE2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.14■□□□□ 0.97
CISHQ9NSE2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CISHQ9NSE2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.14■□□□□ 0.97
CISHQ9NSE2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.14■□□□□ 0.97
CISHQ9NSE2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CISHQ9NSE2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.13■□□□□ 0.97
CISHQ9NSE2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CISHQ9NSE2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CISHQ9NSE2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.13■□□□□ 0.97
CISHQ9NSE2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.13■□□□□ 0.97
CISHQ9NSE2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CISHQ9NSE2 AL121906.2-201ENST00000621597 723 ntBASIC21.13■□□□□ 0.97
CISHQ9NSE2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CISHQ9NSE2 TFP1-202ENST00000475455 1573 ntBASIC21.13■□□□□ 0.97
CISHQ9NSE2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CISHQ9NSE2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CISHQ9NSE2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CISHQ9NSE2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CISHQ9NSE2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.13■□□□□ 0.97
CISHQ9NSE2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CISHQ9NSE2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CISHQ9NSE2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CISHQ9NSE2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CISHQ9NSE2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CISHQ9NSE2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CISHQ9NSE2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CISHQ9NSE2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CISHQ9NSE2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CISHQ9NSE2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 KRT17P3-201ENST00000420566 1262 ntBASIC21.12■□□□□ 0.97
CISHQ9NSE2 POU5F1P3-201ENST00000428824 1078 ntBASIC21.12■□□□□ 0.97
CISHQ9NSE2 TSPY20P-201ENST00000450910 630 ntBASIC21.12■□□□□ 0.97
CISHQ9NSE2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CISHQ9NSE2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 AC233263.1-201ENST00000578059 224 ntBASIC21.12■□□□□ 0.97
CISHQ9NSE2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CISHQ9NSE2 AL121829.2-201ENST00000620908 328 ntBASIC21.12■□□□□ 0.97
CISHQ9NSE2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CISHQ9NSE2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CISHQ9NSE2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CISHQ9NSE2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CISHQ9NSE2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CISHQ9NSE2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CISHQ9NSE2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.11■□□□□ 0.97
CISHQ9NSE2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CISHQ9NSE2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CISHQ9NSE2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.11■□□□□ 0.97
CISHQ9NSE2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CISHQ9NSE2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.11■□□□□ 0.97
CISHQ9NSE2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.11■□□□□ 0.97
CISHQ9NSE2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CISHQ9NSE2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.11■□□□□ 0.97
CISHQ9NSE2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CISHQ9NSE2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CISHQ9NSE2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CISHQ9NSE2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CISHQ9NSE2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CISHQ9NSE2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CISHQ9NSE2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.1■□□□□ 0.97
CISHQ9NSE2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CISHQ9NSE2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.1■□□□□ 0.97
CISHQ9NSE2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CISHQ9NSE2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CISHQ9NSE2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CISHQ9NSE2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CISHQ9NSE2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CISHQ9NSE2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms