Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.54
CTPS2Q9NRF8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CTPS2Q9NRF8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CTPS2Q9NRF8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.39■□□□□ 0.53
CTPS2Q9NRF8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTPS2Q9NRF8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 AL121832.2-201ENST00000610979 668 ntBASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 AC105020.6-201ENST00000621523 1217 ntBASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 MKRN4P-201ENST00000444706 1521 ntBASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTPS2Q9NRF8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 KRT17P1-201ENST00000399211 1546 ntBASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 AC083906.2-201ENST00000511578 360 ntBASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 TMEM179-206ENST00000616017 1645 ntBASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTPS2Q9NRF8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS2Q9NRF8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTPS2Q9NRF8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.35■□□□□ 0.53
CTPS2Q9NRF8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.35■□□□□ 0.53
CTPS2Q9NRF8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CTPS2Q9NRF8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CTPS2Q9NRF8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS2Q9NRF8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.35■□□□□ 0.53
CTPS2Q9NRF8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS2Q9NRF8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms