Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.9■□□□□ 0.78
CLPBQ9H078 AC006557.6-201ENST00000623071 864 ntBASIC19.9■□□□□ 0.78
CLPBQ9H078 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
CLPBQ9H078 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.9■□□□□ 0.78
CLPBQ9H078 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CLPBQ9H078 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLPBQ9H078 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.89■□□□□ 0.77
CLPBQ9H078 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.89■□□□□ 0.77
CLPBQ9H078 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.89■□□□□ 0.77
CLPBQ9H078 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.89■□□□□ 0.77
CLPBQ9H078 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CLPBQ9H078 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.89■□□□□ 0.77
CLPBQ9H078 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.89■□□□□ 0.77
CLPBQ9H078 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.89■□□□□ 0.77
CLPBQ9H078 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.89■□□□□ 0.77
CLPBQ9H078 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLPBQ9H078 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPBQ9H078 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 PTBP1P-201ENST00000554374 1601 ntBASIC19.88■□□□□ 0.77
CLPBQ9H078 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.88■□□□□ 0.77
CLPBQ9H078 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CLPBQ9H078 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.88■□□□□ 0.77
CLPBQ9H078 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLPBQ9H078 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.88■□□□□ 0.77
CLPBQ9H078 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.88■□□□□ 0.77
CLPBQ9H078 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CLPBQ9H078 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.88■□□□□ 0.77
CLPBQ9H078 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLPBQ9H078 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.87■□□□□ 0.77
CLPBQ9H078 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLPBQ9H078 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLPBQ9H078 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.87■□□□□ 0.77
CLPBQ9H078 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CLPBQ9H078 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.87■□□□□ 0.77
CLPBQ9H078 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.87■□□□□ 0.77
CLPBQ9H078 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.87■□□□□ 0.77
CLPBQ9H078 AC120498.8-201ENST00000614275 531 ntBASIC19.87■□□□□ 0.77
CLPBQ9H078 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CLPBQ9H078 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
CLPBQ9H078 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLPBQ9H078 AC112907.3-201ENST00000577781 2400 ntBASIC19.87■□□□□ 0.77
CLPBQ9H078 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.87■□□□□ 0.77
CLPBQ9H078 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPBQ9H078 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLPBQ9H078 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.86■□□□□ 0.77
CLPBQ9H078 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CLPBQ9H078 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CLPBQ9H078 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.86■□□□□ 0.77
CLPBQ9H078 KRT8P17-201ENST00000453110 1448 ntBASIC19.86■□□□□ 0.77
CLPBQ9H078 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.86■□□□□ 0.77
CLPBQ9H078 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CLPBQ9H078 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPBQ9H078 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLPBQ9H078 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLPBQ9H078 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms