Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXP3Q9BZS1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.39■□□□□ 0.86
FOXP3Q9BZS1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
FOXP3Q9BZS1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
FOXP3Q9BZS1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXP3Q9BZS1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FOXP3Q9BZS1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.39■□□□□ 0.86
FOXP3Q9BZS1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXP3Q9BZS1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 FAM201B-201ENST00000458407 597 ntBASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 AC066615.1-201ENST00000640911 628 ntBASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
FOXP3Q9BZS1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 MKRN4P-201ENST00000444706 1521 ntBASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXP3Q9BZS1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms