Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 BET1L-204ENST00000410108 637 ntTSL 3 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 TERF1P5-201ENST00000477545 1207 ntBASIC11.76□□□□□ -0.53
LIMD2Q9BT23 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 AC007322.4-201ENST00000509611 723 ntBASIC11.76□□□□□ -0.53
LIMD2Q9BT23 BRI3-207ENST00000539286 699 ntTSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 MIR2861-201ENST00000636310 90 ntBASIC11.76□□□□□ -0.53
LIMD2Q9BT23 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 BID-203ENST00000399765 1879 ntTSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
LIMD2Q9BT23 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 SPI1-203ENST00000533030 661 ntTSL 2 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 RARRES2P6-201ENST00000567333 442 ntBASIC11.75□□□□□ -0.53
LIMD2Q9BT23 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 AC008694.1-202ENST00000636953 945 ntBASIC11.75□□□□□ -0.53
LIMD2Q9BT23 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC11.75□□□□□ -0.53
LIMD2Q9BT23 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LIMD2Q9BT23 AC020907.5-201ENST00000624372 1936 ntBASIC11.74□□□□□ -0.53
LIMD2Q9BT23 AP005212.1-201ENST00000581547 1997 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms