Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TM2D3Q9BRN9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.3□□□□□ -0.12
TM2D3Q9BRN9 TFP1-202ENST00000475455 1573 ntBASIC14.3□□□□□ -0.12
TM2D3Q9BRN9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TM2D3Q9BRN9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.3□□□□□ -0.12
TM2D3Q9BRN9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 TUBB8P6-201ENST00000436895 1288 ntBASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 AC097488.1-201ENST00000507834 756 ntBASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 AC006011.2-201ENST00000621313 1158 ntBASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 KRT16P6-202ENST00000425692 1426 ntBASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 FBXW4P1-201ENST00000426721 2239 ntBASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TM2D3Q9BRN9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 ECEL1P2-202ENST00000465689 757 ntBASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 AC011506.1-201ENST00000474329 610 ntBASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TM2D3Q9BRN9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TM2D3Q9BRN9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 CRYGFP-201ENST00000418459 633 ntBASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 WWOX-216ENST00000569818 525 ntBASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 SLC25A24-204ENST00000569674 2357 ntBASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 AC005229.4-201ENST00000610085 2198 ntBASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.27□□□□□ -0.13
TM2D3Q9BRN9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM2D3Q9BRN9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms