Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP4Q99569 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP4Q99569 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PKP4Q99569 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP4Q99569 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.28■□□□□ 0.68
PKP4Q99569 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PKP4Q99569 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PKP4Q99569 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.28■□□□□ 0.68
PKP4Q99569 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.28■□□□□ 0.68
PKP4Q99569 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.28■□□□□ 0.68
PKP4Q99569 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.28■□□□□ 0.68
PKP4Q99569 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.28■□□□□ 0.68
PKP4Q99569 AC008687.6-201ENST00000596318 630 ntBASIC19.28■□□□□ 0.68
PKP4Q99569 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PKP4Q99569 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP4Q99569 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.28■□□□□ 0.68
PKP4Q99569 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP4Q99569 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PKP4Q99569 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.28■□□□□ 0.68
PKP4Q99569 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PKP4Q99569 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP4Q99569 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PKP4Q99569 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PKP4Q99569 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
PKP4Q99569 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PKP4Q99569 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PKP4Q99569 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PKP4Q99569 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP4Q99569 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.27■□□□□ 0.68
PKP4Q99569 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PKP4Q99569 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP4Q99569 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.27■□□□□ 0.68
PKP4Q99569 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PKP4Q99569 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PKP4Q99569 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PKP4Q99569 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.27■□□□□ 0.68
PKP4Q99569 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.27■□□□□ 0.68
PKP4Q99569 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PKP4Q99569 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PKP4Q99569 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.27■□□□□ 0.68
PKP4Q99569 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP4Q99569 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.27■□□□□ 0.68
PKP4Q99569 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.27■□□□□ 0.67
PKP4Q99569 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PKP4Q99569 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PKP4Q99569 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.27■□□□□ 0.67
PKP4Q99569 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.26■□□□□ 0.67
PKP4Q99569 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.26■□□□□ 0.67
PKP4Q99569 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PKP4Q99569 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.26■□□□□ 0.67
PKP4Q99569 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.26■□□□□ 0.67
PKP4Q99569 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.26■□□□□ 0.67
PKP4Q99569 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 AC008403.3-201ENST00000598924 454 ntBASIC19.26■□□□□ 0.67
PKP4Q99569 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.26■□□□□ 0.67
PKP4Q99569 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PKP4Q99569 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.26■□□□□ 0.67
PKP4Q99569 AC018553.1-201ENST00000616682 1458 ntBASIC19.26■□□□□ 0.67
PKP4Q99569 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.26■□□□□ 0.67
PKP4Q99569 AC009237.14-201ENST00000609975 1594 ntBASIC19.26■□□□□ 0.67
PKP4Q99569 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PKP4Q99569 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PKP4Q99569 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.25■□□□□ 0.67
PKP4Q99569 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.25■□□□□ 0.67
PKP4Q99569 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PKP4Q99569 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PKP4Q99569 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP4Q99569 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP4Q99569 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
PKP4Q99569 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP4Q99569 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PKP4Q99569 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.25■□□□□ 0.67
PKP4Q99569 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.25■□□□□ 0.67
PKP4Q99569 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.25■□□□□ 0.67
PKP4Q99569 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP4Q99569 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP4Q99569 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.25■□□□□ 0.67
PKP4Q99569 AP001271.2-201ENST00000624018 1556 ntBASIC19.25■□□□□ 0.67
PKP4Q99569 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP4Q99569 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
PKP4Q99569 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.25■□□□□ 0.67
PKP4Q99569 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
PKP4Q99569 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.25■□□□□ 0.67
PKP4Q99569 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.25■□□□□ 0.67
PKP4Q99569 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.25■□□□□ 0.67
PKP4Q99569 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP4Q99569 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PKP4Q99569 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms