Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.05■□□□□ 0.96
TWNKQ96RR1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TWNKQ96RR1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.05■□□□□ 0.96
TWNKQ96RR1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.05■□□□□ 0.96
TWNKQ96RR1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.05■□□□□ 0.96
TWNKQ96RR1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.05■□□□□ 0.96
TWNKQ96RR1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
TWNKQ96RR1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TWNKQ96RR1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.05■□□□□ 0.96
TWNKQ96RR1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TWNKQ96RR1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TWNKQ96RR1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.04■□□□□ 0.96
TWNKQ96RR1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 TMEM191A-211ENST00000637163 1067 ntBASIC21.04■□□□□ 0.96
TWNKQ96RR1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 AFG3L1P-217ENST00000557444 2447 ntBASIC21.04■□□□□ 0.96
TWNKQ96RR1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TWNKQ96RR1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TWNKQ96RR1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.03■□□□□ 0.96
TWNKQ96RR1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.03■□□□□ 0.96
TWNKQ96RR1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TWNKQ96RR1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TWNKQ96RR1 AC009237.14-201ENST00000609975 1594 ntBASIC21.02■□□□□ 0.96
TWNKQ96RR1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TWNKQ96RR1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 C1QBPP2-201ENST00000528754 825 ntBASIC21.02■□□□□ 0.96
TWNKQ96RR1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TWNKQ96RR1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TWNKQ96RR1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TWNKQ96RR1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TWNKQ96RR1 AC125437.2-201ENST00000625180 2167 ntBASIC21.02■□□□□ 0.95
TWNKQ96RR1 AP001271.2-201ENST00000624018 1556 ntBASIC21.02■□□□□ 0.95
TWNKQ96RR1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TWNKQ96RR1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TWNKQ96RR1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TWNKQ96RR1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.01■□□□□ 0.95
TWNKQ96RR1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TWNKQ96RR1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.01■□□□□ 0.95
TWNKQ96RR1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TWNKQ96RR1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
TWNKQ96RR1 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.01■□□□□ 0.95
TWNKQ96RR1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.01■□□□□ 0.95
TWNKQ96RR1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TWNKQ96RR1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.01■□□□□ 0.95
TWNKQ96RR1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.01■□□□□ 0.95
TWNKQ96RR1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TWNKQ96RR1 AC124016.1-201ENST00000609552 612 ntBASIC21.01■□□□□ 0.95
TWNKQ96RR1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TWNKQ96RR1 AL359736.2-201ENST00000621992 437 ntBASIC21.01■□□□□ 0.95
TWNKQ96RR1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.01■□□□□ 0.95
TWNKQ96RR1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TWNKQ96RR1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.01■□□□□ 0.95
TWNKQ96RR1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TWNKQ96RR1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms