Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 AC098934.4-201ENST00000564127 592 ntBASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 AC104771.1-201ENST00000603335 964 ntBASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 HLA-B-256ENST00000639848 1089 ntBASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MS4A4EQ96PG1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 AC069152.1-201ENST00000438030 544 ntBASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MS4A4EQ96PG1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.54
MS4A4EQ96PG1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 AC133041.1-202ENST00000642053 222 ntBASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 AC092368.3-202ENST00000574180 1591 ntBASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
MS4A4EQ96PG1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 AC116351.2-201ENST00000606540 1585 ntBASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms