Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 AC125437.2-201ENST00000625180 2167 ntBASIC20.04■□□□□ 0.8
PTCD2Q8WV60 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 PNMA6B-201ENST00000538162 1200 ntBASIC20.03■□□□□ 0.8
PTCD2Q8WV60 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 AP001271.2-201ENST00000624018 1556 ntBASIC20.03■□□□□ 0.8
PTCD2Q8WV60 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTCD2Q8WV60 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 AC092368.3-202ENST00000574180 1591 ntBASIC20.02■□□□□ 0.8
PTCD2Q8WV60 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PTCD2Q8WV60 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.02■□□□□ 0.79
PTCD2Q8WV60 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTCD2Q8WV60 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTCD2Q8WV60 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTCD2Q8WV60 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTCD2Q8WV60 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTCD2Q8WV60 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 ITM2C-210ENST00000620962 501 ntBASIC20.01■□□□□ 0.79
PTCD2Q8WV60 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCD2Q8WV60 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
PTCD2Q8WV60 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20■□□□□ 0.79
PTCD2Q8WV60 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTCD2Q8WV60 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20■□□□□ 0.79
PTCD2Q8WV60 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCD2Q8WV60 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCD2Q8WV60 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20■□□□□ 0.79
PTCD2Q8WV60 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PTCD2Q8WV60 AC026366.1-201ENST00000488803 879 ntBASIC20■□□□□ 0.79
PTCD2Q8WV60 AP003097.1-201ENST00000530657 1135 ntBASIC20■□□□□ 0.79
PTCD2Q8WV60 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20■□□□□ 0.79
PTCD2Q8WV60 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PTCD2Q8WV60 AC006058.3-201ENST00000606217 1069 ntBASIC20■□□□□ 0.79
PTCD2Q8WV60 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20■□□□□ 0.79
PTCD2Q8WV60 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTCD2Q8WV60 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCD2Q8WV60 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20■□□□□ 0.79
PTCD2Q8WV60 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCD2Q8WV60 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCD2Q8WV60 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.99■□□□□ 0.79
PTCD2Q8WV60 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms