Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.59■■□□□ 1.37
SH3RF3Q8TEJ3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.59■■□□□ 1.37
SH3RF3Q8TEJ3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 C1QL1P1-201ENST00000568105 661 ntBASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 REXO1L10P-201ENST00000615707 1290 ntBASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.58■■□□□ 1.37
SH3RF3Q8TEJ3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SH3RF3Q8TEJ3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
SH3RF3Q8TEJ3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 YBX1P10-201ENST00000444752 975 ntBASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 KSR1P1-201ENST00000446298 240 ntBASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 AC133561.5-201ENST00000635547 218 ntBASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
SH3RF3Q8TEJ3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 KRT18P16-201ENST00000510337 1294 ntBASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 LINC01023-201ENST00000606054 436 ntBASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF3Q8TEJ3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 RBM17P1-201ENST00000453646 1190 ntBASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 AL512408.1-201ENST00000569378 2000 ntBASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SH3RF3Q8TEJ3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 AP005212.1-201ENST00000581547 1997 ntBASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 KRT16P1-201ENST00000399124 1418 ntBASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 AC079598.2-202ENST00000546624 1451 ntBASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF3Q8TEJ3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SH3RF3Q8TEJ3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF3Q8TEJ3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF3Q8TEJ3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF3Q8TEJ3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF3Q8TEJ3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SH3RF3Q8TEJ3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF3Q8TEJ3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.53■■□□□ 1.36
SH3RF3Q8TEJ3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms