Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 AC239809.2-201ENST00000415381 517 ntBASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.81■□□□□ 0.44
FNDC9Q8TBE3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 AC020907.5-201ENST00000624372 1936 ntBASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 AC093827.2-201ENST00000512654 315 ntBASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FNDC9Q8TBE3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 AP006294.2-201ENST00000641667 209 ntBASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FNDC9Q8TBE3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 UBE2SP1-201ENST00000450587 669 ntBASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 PRKY-204ENST00000533551 1019 ntBASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 AC124016.1-201ENST00000609552 612 ntBASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 AL121829.2-201ENST00000620908 328 ntBASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 AL121906.2-201ENST00000621597 723 ntBASIC17.78■□□□□ 0.44
FNDC9Q8TBE3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms