Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SIMC1Q8NDZ2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.64■□□□□ 0.58
SIMC1Q8NDZ2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.64■□□□□ 0.58
SIMC1Q8NDZ2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIMC1Q8NDZ2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 TMEM191A-211ENST00000637163 1067 ntBASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 KRT8P20-201ENST00000423953 1409 ntBASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.63■□□□□ 0.57
SIMC1Q8NDZ2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 AC023632.3-201ENST00000521633 145 ntBASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 AC006557.6-201ENST00000623071 864 ntBASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 AC125437.2-201ENST00000625180 2167 ntBASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIMC1Q8NDZ2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SIMC1Q8NDZ2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 AC092368.3-202ENST00000574180 1591 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms